Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g40990 Schrenkiella parvula HOM05D002006 ORTHO05D002128 8.3e-44 179.9 84 100.0
Sp6g04680 Schrenkiella parvula HOM05D002006 ORTHO05D002128 2.8e-15 85.1 42 92.9
BcaB06g28404 Brassica carinata HOM05D002006 ORTHO05D002128 7.6e-13 77.0 42 78.6
BcaB06g28475 Brassica carinata HOM05D002006 ORTHO05D002128 1.3e-12 76.3 42 78.6
A04p23770 Brassica napus HOM05D002006 ORTHO05D002128 1.3e-12 76.3 42 78.6
Thhalv10029325m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 1.3e-12 76.3 43 81.4
BraA04t17903Z Brassica rapa HOM05D002006 ORTHO05D002128 2.9e-12 75.1 42 76.2
BraA04t17902Z Brassica rapa HOM05D002006 ORTHO05D002128 3.2e-11 71.6 42 73.8
C04p60210 Brassica napus HOM05D002006 ORTHO05D002128 1.2e-10 69.7 44 75.0
BolC4t27522H Brassica oleracea HOM05D002006 ORTHO05D002128 1.2e-10 69.7 44 75.0
BolC4t27524H Brassica oleracea HOM05D002006 ORTHO05D002128 6.0e-10 67.4 43 74.4
Thhalv10017692m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 7.8e-10 67.0 46 73.9
BcaB01g03542 Brassica carinata HOM05D002006 ORTHO05D002128 5.1e-09 64.3 47 68.1
BcaC01g05401 Brassica carinata HOM05D002006 ORTHO05D002128 8.7e-09 63.5 47 68.1
BolC3t15080H Brassica oleracea HOM05D002006 ORTHO05D002128 8.7e-09 63.5 47 68.1
BcaB01g03541 Brassica carinata HOM05D002006 ORTHO05D002128 1.1e-08 63.2 47 68.1
C03p26970 Brassica napus HOM05D002006 ORTHO05D002128 3.3e-08 61.6 47 66.0
BolC3t15079H Brassica oleracea HOM05D002006 ORTHO05D002128 3.3e-08 61.6 47 66.0
Thhalv10017581m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 3.3e-08 61.6 46 69.6
Thhalv10017253m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 4.3e-08 61.2 46 67.4
Carub.0004s2270 Capsella rubella HOM05D002006 ORTHO05D002128 7.3e-08 60.5 46 65.2
C03p26980 Brassica napus HOM05D002006 ORTHO05D002128 1.6e-07 59.3 47 63.8
CARHR135560 Cardamine hirsuta HOM05D002006 ORTHO05D002128 1.6e-07 59.3 47 63.8
AL4G38280 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 2.1e-07 58.9 44 63.6
BcaB06g28480 Brassica carinata HOM05D002006 ORTHO05D021918 2.1e-07 58.9 46 58.7
A03p22730 Brassica napus HOM05D002006 ORTHO05D002128 3.6e-07 58.2 47 63.8
A03p22740 Brassica napus HOM05D002006 ORTHO05D002128 3.6e-07 58.2 47 61.7
BraA03t11497Z Brassica rapa HOM05D002006 ORTHO05D002128 3.6e-07 58.2 47 63.8
BraA03t11498Z Brassica rapa HOM05D002006 ORTHO05D002128 3.6e-07 58.2 47 61.7
Sp7g13200 Schrenkiella parvula HOM05D002006 ORTHO05D002128 3.6e-07 58.2 45 60.0
BcaB02g07843 Brassica carinata HOM05D002006 ORTHO05D002128 4.7e-07 57.8 45 62.2
A05p16920 Brassica napus HOM05D002006 ORTHO05D002128 4.7e-07 57.8 45 60.0
A04p23790 Brassica napus HOM05D002006 ORTHO05D021918 6.2e-07 57.4 46 58.7
C04p01980 Brassica napus HOM05D002006 ORTHO05D002128 6.2e-07 57.4 48 54.2
BolC4t21848H Brassica oleracea HOM05D002006 ORTHO05D002128 6.2e-07 57.4 48 54.2
Carub.0005s0831 Capsella rubella HOM05D002006 ORTHO05D002128 6.2e-07 57.4 45 60.0
BcaB01g01794 Brassica carinata HOM05D002006 ORTHO05D002128 8.1e-07 57.0 46 60.9
BcaB06g28405 Brassica carinata HOM05D002006 ORTHO05D021918 8.1e-07 57.0 46 56.5
Aa31sc689G10 Aethionema arabicum HOM05D002006 ORTHO05D002128 1.1e-06 56.6 62 43.5
BolC3t15078H Brassica oleracea HOM05D002006 ORTHO05D002128 1.4e-06 56.2 47 61.7
Aa31LG5G19080 Aethionema arabicum HOM05D002006 ORTHO05D002128 1.8e-06 55.8 46 54.3
AT5G48510 Arabidopsis thaliana HOM05D002006 ORTHO05D002128 1.8e-06 55.8 45 62.2
A05p01710 Brassica napus HOM05D002006 ORTHO05D002128 1.8e-06 55.8 47 53.2
Aa31sc19G50 Aethionema arabicum HOM05D002006 ORTHO05D002128 3.1e-06 55.1 62 43.5
Aa31sc26G50 Aethionema arabicum HOM05D002006 ORTHO05D002128 3.1e-06 55.1 62 41.9
AL4G38290 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 3.1e-06 55.1 47 66.0
C03p26960 Brassica napus HOM05D002006 ORTHO05D002128 3.1e-06 55.1 47 59.6
BraA05t19168Z Brassica rapa HOM05D002006 ORTHO05D002128 3.1e-06 55.1 47 55.3
Thhalv10012296m.g Eutrema salsugineum HOM05D002006 ORTHO05D002128 4.0e-06 54.7 47 57.4
Aa31sc126G20 Aethionema arabicum HOM05D002006 ORTHO05D002128 5.2e-06 54.3 44 61.4
Aa31sc19G20 Aethionema arabicum HOM05D002006 ORTHO05D002128 5.2e-06 54.3 47 51.1
Aa31sc351G30 Aethionema arabicum HOM05D002006 ORTHO05D002128 5.2e-06 54.3 44 61.4
AL8G21380 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 5.2e-06 54.3 45 60.0
AL8G21400 Arabidopsis lyrata HOM05D002006 ORTHO05D002128 5.2e-06 54.3 45 57.8
BraA05t20596Z Brassica rapa HOM05D002006 ORTHO05D002128 9.0e-06 53.5 45 55.6


User provided reference genes

Program Settings