Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 6.1e-43 177.2 96 100.0
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 3.4e-33 144.8 98 86.7
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 3.7e-32 141.4 94 86.2
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 3.7e-32 141.4 94 86.2
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 8.3e-32 140.2 97 82.5
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 1.1e-31 139.8 97 82.5
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 1.4e-31 139.4 94 86.2
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.4e-31 139.4 98 80.6
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 2.0e-30 135.6 97 79.4
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 5.0e-29 131.0 91 81.3
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 8.6e-29 130.2 96 80.2
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 8.6e-29 130.2 96 80.2
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 5.6e-28 127.5 96 78.1
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 5.6e-28 127.5 96 79.2
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 5.6e-28 127.5 96 78.1
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 3.6e-27 124.8 86 84.9
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 1.0e-21 106.7 99 68.7
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 2.3e-21 105.5 101 65.3
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 5.6e-20 100.9 99 67.7
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 1.6e-19 99.4 100 70.0
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 8.1e-19 97.1 99 66.7
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 6.8e-18 94.0 100 60.0
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 1.5e-17 92.8 98 59.2
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 3.4e-17 91.7 98 63.3
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 7.6e-17 90.5 100 59.0
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 7.6e-17 90.5 99 57.6
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.7e-16 89.4 101 58.4
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 1.7e-16 89.4 103 55.3
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 2.2e-16 89.0 98 57.1
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 3.7e-16 88.2 97 56.7
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 4.9e-16 87.8 91 58.2
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 6.4e-16 87.4 102 55.9
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 8.3e-16 87.0 99 58.6
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 1.4e-15 86.3 96 58.3
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 4.1e-15 84.7 94 58.5
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 5.4e-15 84.3 99 54.5
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 9.2e-15 83.6 96 56.2
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 1.6e-14 82.8 95 54.7
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 2.1e-14 82.4 98 57.1
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 3.5e-14 81.6 97 53.6
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 3.5e-14 81.6 99 54.5
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 6.0e-14 80.9 102 52.0
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 1.0e-13 80.1 106 50.9
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 1.0e-13 80.1 91 58.2
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 1.3e-13 79.7 99 50.5
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 1.3e-13 79.7 99 52.5
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.7e-13 79.3 99 53.5
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 5.1e-13 77.8 93 55.9
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 5.1e-13 77.8 104 55.8
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 5.1e-13 77.8 90 51.1
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 8.6e-13 77.0 98 55.1
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 1.1e-12 76.6 99 53.5
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.5e-12 76.3 99 53.5
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 1.5e-12 76.3 93 54.8
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 1.5e-12 76.3 96 52.1
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 3.3e-12 75.1 101 48.5
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 3.3e-12 75.1 99 53.5
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 4.3e-12 74.7 97 54.6
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 4.3e-12 74.7 98 54.1
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 5.6e-12 74.3 99 51.5
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.6e-12 74.3 98 49.0
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 5.6e-12 74.3 64 71.9
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 5.6e-12 74.3 91 50.5
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 7.3e-12 73.9 99 51.5
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 9.6e-12 73.6 100 51.0
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 9.6e-12 73.6 94 52.1
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 9.6e-12 73.6 98 49.0
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.2e-11 73.2 86 53.5
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 1.6e-11 72.8 94 55.3
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 2.1e-11 72.4 101 53.5
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 3.6e-11 71.6 96 50.0
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 4.7e-11 71.2 89 52.8
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 6.2e-11 70.9 47 72.3
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 8.1e-11 70.5 96 50.0
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 8.1e-11 70.5 104 49.0
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 1.4e-10 69.7 94 53.2
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 1.4e-10 69.7 88 50.0
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 1.4e-10 69.7 105 49.5
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 1.8e-10 69.3 97 49.5
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 4.0e-10 68.2 104 49.0
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 5.2e-10 67.8 99 46.5
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 8.9e-10 67.0 97 53.6
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 1.2e-09 66.6 86 51.2
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 1.5e-09 66.2 95 49.5
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 2.0e-09 65.9 96 47.9
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 2.6e-09 65.5 95 46.3
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 2.6e-09 65.5 91 57.1
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 7.6e-09 63.9 96 46.9
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 1.3e-08 63.2 91 49.5
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 1.7e-08 62.8 55 65.5
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 3.8e-08 61.6 92 47.8
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 8.4e-08 60.5 68 51.5
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.9e-07 59.3 61 55.7
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 5.4e-07 57.8 60 58.3
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 7.1e-07 57.4 88 46.6
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 2.1e-06 55.8 53 56.6
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 2.7e-06 55.5 95 49.5
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 3.5e-06 55.1 96 38.5
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 6.0e-06 54.3 83 47.0
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 6.0e-06 54.3 98 41.8
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 7.8e-06 53.9 88 44.3


User provided reference genes

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