Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 2.9e-36 155.2 111 100.0
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 1.0e-33 146.7 76 98.7
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 1.1e-30 136.7 72 97.2
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 2.4e-30 135.6 72 95.8
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 2.4e-30 135.6 73 94.5
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-29 132.9 74 91.9
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 2.0e-29 132.5 73 91.8
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 2.0e-29 132.5 73 91.8
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 3.4e-29 131.7 73 91.8
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.4e-27 126.3 72 93.1
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.0e-25 120.2 74 85.1
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 3.0e-25 118.6 73 86.3
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 3.1e-22 108.6 75 76.0
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 3.8e-20 101.7 56 96.4
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 8.4e-20 100.5 75 68.0
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 1.4e-19 99.8 75 68.0
AL4G26530 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 1.4e-19 99.8 55 96.4
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 5.5e-19 97.8 74 70.3
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 7.1e-19 97.4 68 82.4
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 7.1e-19 97.4 68 82.4
BcaB06g28444 Brassica carinata HOM05D006246 ORTHO05D007932 9.3e-19 97.1 55 92.7
C04p19050 Brassica napus HOM05D006246 ORTHO05D007932 2.7e-18 95.5 56 89.3
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.7e-18 95.5 67 73.1
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 4.6e-18 94.7 61 82.0
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 4.6e-18 94.7 75 65.3
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 7.9e-18 94.0 80 65.0
A04p24110 Brassica napus HOM05D006246 ORTHO05D007932 3.0e-17 92.0 58 89.7
C04p60820 Brassica napus HOM05D006246 ORTHO05D007932 3.0e-17 92.0 58 89.7
BraA04t17931Z Brassica rapa HOM05D006246 ORTHO05D007932 3.0e-17 92.0 58 89.7
BraA05t20360Z Brassica rapa HOM05D006246 ORTHO05D007932 5.1e-17 91.3 56 91.1
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 6.7e-17 90.9 78 64.1
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 8.7e-17 90.5 60 80.0
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.1e-16 90.1 58 79.3
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.1e-16 90.1 77 62.3
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.5e-16 89.7 77 61.0
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 1.9e-16 89.4 81 60.5
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 1.9e-16 89.4 49 85.7
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.9e-16 89.4 73 68.5
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 5.7e-16 87.8 49 83.7
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 5.7e-16 87.8 49 83.7
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 7.4e-16 87.4 46 89.1
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 1.6e-15 86.3 81 61.7
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 2.2e-15 85.9 76 64.5
AL2G35340 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 2.8e-15 85.5 60 78.3
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 2.8e-15 85.5 44 88.6
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.8e-15 85.5 44 88.6
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.8e-15 85.5 44 88.6
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 4.8e-15 84.7 72 59.7
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 6.3e-15 84.3 52 80.8
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 1.1e-14 83.6 83 57.8
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.1e-14 83.6 56 76.8
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.1e-14 83.6 47 83.0
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.8e-14 82.8 57 73.7
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 2.4e-14 82.4 74 62.2
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 4.1e-14 81.6 53 69.8
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 5.3e-14 81.3 65 61.5
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 5.3e-14 81.3 45 84.4
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 5.3e-14 81.3 45 86.7
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 5.3e-14 81.3 43 83.7
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 6.9e-14 80.9 73 61.6
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 6.9e-14 80.9 73 61.6
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 6.9e-14 80.9 49 75.5
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 9.0e-14 80.5 42 83.3
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 9.0e-14 80.5 51 74.5
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.2e-13 80.1 52 73.1
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 1.5e-13 79.7 42 85.7
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 2.6e-13 79.0 42 85.7
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 2.6e-13 79.0 47 76.6
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 2.6e-13 79.0 47 76.6
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 5.9e-13 77.8 52 69.2
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 7.6e-13 77.4 80 58.8
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 1.3e-12 76.6 43 76.7
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 1.3e-12 76.6 36 91.7
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.9e-12 75.5 35 94.3
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 6.5e-12 74.3 49 75.5
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 6.5e-12 74.3 43 79.1
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.1e-11 73.6 46 71.7
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.4e-11 73.2 47 70.2
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 1.4e-11 73.2 46 71.7
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 1.9e-11 72.8 47 70.2
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.9e-11 72.8 35 91.4
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 1.9e-11 72.8 44 75.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 1.9e-11 72.8 74 55.4
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 1.9e-11 72.8 36 83.3
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 2.5e-11 72.4 43 72.1
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 3.2e-11 72.0 78 55.1
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 4.2e-11 71.6 33 93.9
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 5.5e-11 71.2 39 76.9
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 5.5e-11 71.2 46 69.6
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 5.5e-11 71.2 45 71.1
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 1.6e-10 69.7 48 72.9
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 1.6e-10 69.7 70 54.3
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.1e-10 69.3 41 80.5
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 2.1e-10 69.3 50 68.0
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 2.7e-10 68.9 38 76.3
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.7e-10 68.9 38 76.3
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 3.6e-10 68.6 37 81.1
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 1.0e-09 67.0 54 64.8
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.0e-09 67.0 48 66.7
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 1.8e-09 66.2 44 70.5
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 1.8e-09 66.2 36 80.6
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 5.1e-09 64.7 58 55.2
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 1.5e-08 63.2 34 79.4
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.5e-08 63.2 82 46.3
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.9e-08 62.8 38 71.1
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 2.5e-08 62.4 77 46.8
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 4.3e-08 61.6 45 64.4
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 2.2e-07 59.3 77 42.9
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.8e-07 58.9 40 67.5
EL10Ac1g00152 Beta vulgaris HOM05D006246 ORTHO05D007932 6.9e-06 54.3 57 59.6
Gohir.A05G410800 Gossypium hirsutum HOM05D006246 ORTHO05D007932 9.1e-06 53.9 38 68.4
Nn5g27268 Nelumbo nucifera HOM05D006246 ORTHO05D007932 9.1e-06 53.9 58 53.4
Pp3c16_16780 Physcomitrium patens HOM05D006246 ORTHO05D007932 9.1e-06 53.9 74 43.2


User provided reference genes

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