Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 1.8e-162 575.9 294 100.0
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 1.0e-157 560.1 294 96.3
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 3.9e-157 558.1 294 96.3
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 3.9e-157 558.1 292 96.9
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 8.7e-157 557.0 292 96.6
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 8.7e-157 557.0 292 96.6
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 8.7e-157 557.0 292 96.6
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.5e-156 556.2 292 96.6
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 1.6e-155 552.7 294 94.6
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 3.7e-155 551.6 294 93.9
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 3.7e-155 551.6 294 94.9
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 8.2e-155 550.4 292 95.5
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 2.0e-153 545.8 288 95.1
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 4.5e-153 544.7 294 93.5
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 4.5e-153 544.7 294 94.9
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.8e-152 541.6 294 93.5
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 2.7e-150 535.4 288 93.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 3.9e-149 531.6 296 90.2
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.8e-146 522.7 294 87.8
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.2e-145 520.0 294 87.1
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 4.5e-145 518.1 297 87.9
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 7.7e-145 517.3 297 87.9
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.3e-144 516.5 294 85.7
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.9e-144 515.4 294 85.7
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 3.8e-144 515.0 299 86.6
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.1e-143 513.5 294 84.7
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.2e-143 511.5 303 84.5
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 4.2e-143 511.5 295 86.8
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 1.2e-142 510.0 295 87.1
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.6e-142 508.4 300 85.0
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 3.6e-142 508.4 295 85.1
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 4.6e-142 508.1 296 85.8
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 6.1e-142 507.7 290 86.2
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 1.0e-141 506.9 293 85.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.0e-141 506.9 296 86.1
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.0e-141 506.9 298 84.6
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 1.4e-141 506.5 296 85.8
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.8e-141 506.1 298 84.2
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 3.9e-141 505.0 302 83.4
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 5.1e-141 504.6 292 86.0
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 6.7e-141 504.2 296 85.1
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.5e-140 503.1 301 82.7
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 3.3e-140 501.9 280 87.1
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.3e-140 501.9 294 84.7
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 4.3e-140 501.5 300 85.7
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 1.3e-139 500.0 296 83.8
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.7e-139 499.6 273 89.7
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.7e-139 499.6 296 83.4
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 4.8e-139 498.0 295 83.7
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.1e-138 496.9 307 82.1
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-138 496.9 302 81.5
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.1e-138 496.9 300 83.3
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 1.1e-138 496.9 302 81.8
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.4e-138 496.5 303 81.5
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.4e-138 496.5 306 81.7
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.4e-138 496.5 302 82.1
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.8e-138 496.1 280 86.1
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.8e-138 496.1 280 86.1
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.8e-138 496.1 298 83.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.1e-138 495.4 294 83.0
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 4.1e-138 495.0 307 80.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 5.3e-138 494.6 280 84.3
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 5.3e-138 494.6 295 83.4
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 6.9e-138 494.2 296 82.1
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 9.1e-138 493.8 298 81.5
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 9.1e-138 493.8 297 83.5
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 9.1e-138 493.8 303 81.8
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.2e-137 493.4 280 85.7
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.5e-137 493.0 279 84.2
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 1.5e-137 493.0 298 81.9
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 2.0e-137 492.7 294 82.3
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.0e-137 492.7 298 82.2
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 3.4e-137 491.9 298 81.2
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 4.5e-137 491.5 280 84.6
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 7.7e-137 490.7 294 83.7
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 1.7e-136 489.6 306 81.7
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 2.2e-136 489.2 280 83.6
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 3.8e-136 488.4 299 81.9
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 6.5e-136 487.6 296 82.8
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.4e-135 486.5 282 83.3
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.4e-135 486.5 280 86.1
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 1.9e-135 486.1 289 83.0
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 7.2e-135 484.2 289 82.7
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 3.6e-134 481.9 298 81.2
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 4.7e-134 481.5 300 78.3
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 4.7e-134 481.5 292 80.8
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.8e-133 479.6 298 80.9
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 1.8e-133 479.6 295 80.7
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 2.3e-133 479.2 285 87.4
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 2.3e-133 479.2 284 83.1
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 5.1e-133 478.0 295 78.3
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.5e-132 476.5 296 80.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 4.4e-132 474.9 294 81.0
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.7e-131 473.0 300 79.3
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.8e-131 471.5 290 80.7
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 8.2e-131 470.7 293 80.2
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.8e-130 469.5 299 80.3
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 9.1e-130 467.2 300 82.0
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.6e-129 466.5 298 78.5
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.6e-129 465.7 311 76.2
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.0e-128 463.8 290 80.0
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 1.3e-128 463.4 265 84.9
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 5.0e-128 461.5 291 79.0
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 6.5e-128 461.1 283 80.2
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.1e-127 460.3 292 77.4
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 1.1e-127 460.3 291 79.4
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 5.5e-127 458.0 281 79.7
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 8.0e-126 454.1 282 79.1
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 8.0e-126 454.1 291 77.3
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 8.0e-126 454.1 300 76.0
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.0e-125 453.8 281 80.8
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 3.0e-125 452.2 290 77.9
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 4.0e-125 451.8 292 77.7
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 2.6e-124 449.1 384 65.1
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.3e-123 446.8 302 73.8
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 2.2e-123 446.0 326 72.4
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.8e-123 445.7 292 76.7
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.4e-122 443.4 263 82.5
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 2.7e-121 439.1 300 73.3
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.5e-121 438.3 251 84.9
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.5e-121 438.3 266 80.5
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 7.7e-121 437.6 298 74.5
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 7.0e-114 414.5 251 80.5
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.7e-113 412.5 221 90.0
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 2.7e-113 412.5 280 75.4
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 2.2e-112 409.5 261 77.0
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 6.5e-112 407.9 278 70.1
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 3.2e-111 405.6 221 88.2
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.0e-109 399.1 218 87.6
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.0e-109 399.1 218 87.6
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 8.3e-107 391.0 250 74.8
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.5e-103 379.4 251 72.5
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 5.6e-103 378.3 250 71.2
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.2e-102 377.1 212 86.3
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.0e-100 369.8 298 66.1
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.3e-99 367.1 255 68.6
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.3e-99 367.1 200 88.0
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 1.0e-93 347.4 215 80.0
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 7.5e-92 341.3 182 90.1
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 1.1e-90 337.4 182 90.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 7.3e-87 324.7 208 78.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 7.1e-82 308.1 174 86.2
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 3.9e-80 302.4 190 79.5
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.6e-78 295.8 221 72.9
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.5e-71 273.9 152 86.2
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.4e-66 255.4 194 66.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 5.4e-66 255.4 209 69.4
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.8e-61 240.4 146 80.8
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 7.6e-52 208.4 119 83.2
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.0e-48 196.4 236 49.2
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 5.3e-45 185.7 158 62.7
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 9.0e-45 184.9 136 70.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 2.0e-44 183.7 105 83.8
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 1.4e-42 177.6 177 57.1
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 7.4e-39 165.2 96 82.3
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 3.7e-38 162.9 93 91.4
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 2.4e-37 160.2 87 86.2
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 9.7e-31 138.3 305 32.5
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.1e-29 133.3 88 72.7
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 2.6e-28 130.2 196 43.4
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-25 121.3 66 92.4
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.2e-25 121.3 66 92.4
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.6e-25 119.8 170 42.4
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.9e-18 97.4 87 66.7
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.9e-18 97.4 87 66.7
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 1.4e-16 91.3 53 79.2
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.4e-16 91.3 158 39.2
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.3e-15 86.7 80 57.5
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-15 86.3 85 54.1
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 6.3e-14 82.4 92 53.3
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.4e-13 81.3 75 60.0
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 1.8e-13 80.9 76 67.1
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 2.0e-12 77.4 103 46.6
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.8e-11 73.2 110 40.9
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 6.5e-11 72.4 59 61.0
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.8e-08 64.3 57 52.6
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.2e-07 61.6 43 72.1
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 9.7e-07 58.5 53 56.6
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.7e-07 58.5 34 76.5


User provided reference genes

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