Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g38020 Schrenkiella parvula HOM05D003595 ORTHO05D004132 2.8e-45 185.3 120 100.0
BcaB04g17226 Brassica carinata HOM05D003595 ORTHO05D004132 5.3e-36 154.5 120 80.0
A06p02550 Brassica napus HOM05D003595 ORTHO05D004132 5.3e-36 154.5 120 80.0
BcaC08g43305 Brassica carinata HOM05D003595 ORTHO05D004132 2.0e-35 152.5 120 79.2
C06p06520 Brassica napus HOM05D003595 ORTHO05D004132 2.0e-35 152.5 120 79.2
BolC6t35764H Brassica oleracea HOM05D003595 ORTHO05D004132 2.0e-35 152.5 120 79.2
BcaB02g11234 Brassica carinata HOM05D003595 ORTHO05D004132 7.7e-35 150.6 120 77.5
BraA06t23462Z Brassica rapa HOM05D003595 ORTHO05D004132 7.7e-35 150.6 121 79.3
BcaC01g01256 Brassica carinata HOM05D003595 ORTHO05D004132 1.3e-34 149.8 120 85.0
BolC3t21307H Brassica oleracea HOM05D003595 ORTHO05D004132 1.3e-34 149.8 120 85.0
Thhalv10011876m.g Eutrema salsugineum HOM05D003595 ORTHO05D004132 2.2e-34 149.1 120 79.2
BcaC05g27345 Brassica carinata HOM05D003595 ORTHO05D004132 5.0e-34 147.9 120 68.3
C05p32690 Brassica napus HOM05D003595 ORTHO05D004132 5.0e-34 147.9 120 68.3
BolC5t32002H Brassica oleracea HOM05D003595 ORTHO05D004132 5.0e-34 147.9 120 68.3
A05p19650 Brassica napus HOM05D003595 ORTHO05D004132 8.5e-34 147.1 120 68.3
C03p89850 Brassica napus HOM05D003595 ORTHO05D004132 1.4e-33 146.4 120 82.5
BraA05t20870Z Brassica rapa HOM05D003595 ORTHO05D004132 1.2e-32 143.3 120 65.0
BraA05t20871Z Brassica rapa HOM05D003595 ORTHO05D004132 1.2e-32 143.3 120 65.0
AL1G59180 Arabidopsis lyrata HOM05D003595 ORTHO05D004132 8.8e-31 137.1 123 65.0
AT1G51355 Arabidopsis thaliana HOM05D003595 ORTHO05D004132 2.6e-30 135.6 118 77.1
BraA08t32331Z Brassica rapa HOM05D003595 ORTHO05D004132 1.2e-27 126.7 119 69.7
BcaB07g33584 Brassica carinata HOM05D003595 ORTHO05D004132 5.0e-26 121.3 106 75.5
CARHR041430 Cardamine hirsuta HOM05D003595 ORTHO05D004132 7.5e-22 107.5 122 63.9
Carub.0001s4023 Capsella rubella HOM05D003595 ORTHO05D004132 9.4e-17 90.5 68 69.1
CARHR096780 Cardamine hirsuta HOM05D003595 ORTHO05D004132 1.6e-11 73.2 57 63.2
BcaB06g26163 Brassica carinata HOM05D003595 ORTHO05D004132 3.5e-11 72.0 53 64.2
AT3G20898 Arabidopsis thaliana HOM05D003595 ORTHO05D004132 4.5e-11 71.6 53 62.3
BraA05t21668Z Brassica rapa HOM05D003595 ORTHO05D004132 1.0e-10 70.5 53 62.3
THA.LOC104817909 Tarenaya hassleriana HOM05D003595 ORTHO05D004132 1.0e-10 70.5 119 40.3
BcaB06g26165 Brassica carinata HOM05D003595 ORTHO05D004132 1.7e-10 69.7 53 62.3
BcaC05g28203 Brassica carinata HOM05D003595 ORTHO05D004132 1.7e-10 69.7 53 62.3
C05p43150 Brassica napus HOM05D003595 ORTHO05D004132 1.7e-10 69.7 53 62.3
BolC5t33045H Brassica oleracea HOM05D003595 ORTHO05D004132 1.7e-10 69.7 53 62.3
Thhalv10022277m.g Eutrema salsugineum HOM05D003595 ORTHO05D004132 1.7e-10 69.7 55 58.2
A05p27810 Brassica napus HOM05D003595 ORTHO05D004132 2.3e-10 69.3 53 62.3
Rhsim01G0191900 Rhododendron simsii HOM05D003595 ORTHO05D004132 8.6e-10 67.4 57 52.6
A03p41960 Brassica napus HOM05D003595 ORTHO05D004132 1.1e-09 67.0 53 58.5
BcaB04g20620 Brassica carinata HOM05D003595 ORTHO05D004132 1.5e-09 66.6 52 61.5
Haze_23141 Corylus avellana HOM05D003595 ORTHO05D004132 1.5e-09 66.6 58 51.7
Potri.001G257700 Populus trichocarpa HOM05D003595 ORTHO05D004132 1.9e-09 66.2 122 35.2
BraA03t13349Z Brassica rapa HOM05D003595 ORTHO05D004132 2.5e-09 65.9 53 56.6
BcaC01g03534 Brassica carinata HOM05D003595 ORTHO05D004132 3.3e-09 65.5 53 56.6
C03p51360 Brassica napus HOM05D003595 ORTHO05D004132 3.3e-09 65.5 53 56.6
Cfa009775 Carpinus fangiana HOM05D003595 ORTHO05D004132 3.3e-09 65.5 58 50.0
CiPaw.14G118800 Carya illinoinensis HOM05D003595 ORTHO05D004132 4.2e-09 65.1 119 38.7
BolC3t17422H Brassica oleracea HOM05D003595 ORTHO05D004132 5.5e-09 64.7 51 56.9
CiPaw.13G160700 Carya illinoinensis HOM05D003595 ORTHO05D004132 5.5e-09 64.7 58 51.7
BolC1t04289H Brassica oleracea HOM05D003595 ORTHO05D004132 7.2e-09 64.3 54 57.4
Sp3g18930 Schrenkiella parvula HOM05D003595 ORTHO05D004132 1.2e-08 63.5 50 56.0
C01p43270 Brassica napus HOM05D003595 ORTHO05D004132 2.1e-08 62.8 54 55.6
AL3G34860 Arabidopsis lyrata HOM05D003595 ORTHO05D004132 2.8e-08 62.4 50 60.0
A01p33890 Brassica napus HOM05D003595 ORTHO05D004132 6.1e-08 61.2 54 53.7
TAR633G0913 Trochodendron aralioides HOM05D003595 ORTHO05D004132 6.1e-08 61.2 114 34.2
BraA01t03497Z Brassica rapa HOM05D003595 ORTHO05D004132 8.0e-08 60.8 53 54.7
Carub.0003s2088 Capsella rubella HOM05D003595 ORTHO05D004132 8.0e-08 60.8 50 58.0
Actinidia06343 Actinidia chinensis HOM05D003595 ORTHO05D004132 1.0e-07 60.5 60 45.0
Dinv22175 Davidia involucrata HOM05D000545 ORTHO05D000539 1.0e-07 60.5 116 36.2
Manes.06G164000 Manihot esculenta HOM05D003595 ORTHO05D004132 1.4e-07 60.1 58 46.6
CSS0047718 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 1.8e-07 59.7 113 41.6
QL01p004672 Quercus lobata HOM05D003595 ORTHO05D004132 1.8e-07 59.7 121 34.7
Actinidia24526 Actinidia chinensis HOM05D003595 ORTHO05D004132 2.3e-07 59.3 54 50.0
Dinv18068 Davidia involucrata HOM05D003595 ORTHO05D004132 4.0e-07 58.5 56 51.8
Actinidia23974 Actinidia chinensis HOM05D003595 ORTHO05D004132 5.2e-07 58.2 117 35.0
Manes.14G003000 Manihot esculenta HOM05D003595 ORTHO05D004132 6.8e-07 57.8 115 37.4
MD03G1174700 Malus domestica HOM05D003595 ORTHO05D004132 8.9e-07 57.4 57 50.9
Aa31LG8G7720 Aethionema arabicum HOM05D003595 ORTHO05D004132 2.6e-06 55.8 86 39.5
CSS0046994 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 2.6e-06 55.8 117 34.2
CANSAT54G2715 Cannabis sativa HOM05D003595 ORTHO05D004132 3.4e-06 55.5 56 48.2
Gohir.A09G114100 Gossypium hirsutum HOM05D003595 ORTHO05D004132 3.4e-06 55.5 56 46.4
Gohir.D09G110700 Gossypium hirsutum HOM05D003595 ORTHO05D004132 3.4e-06 55.5 56 46.4
Gorai.006G128400 Gossypium raimondii HOM05D003595 ORTHO05D004132 3.4e-06 55.5 56 46.4
Oeu063323.1 Olea europaea HOM05D003595 ORTHO05D004132 3.4e-06 55.5 56 46.4
Sabra16G0157600 Salix brachista HOM05D003595 ORTHO05D004132 3.4e-06 55.5 128 32.8
Duzib168G1914 Durio zibethinus HOM05D003595 ORTHO05D004132 4.4e-06 55.1 55 49.1
Eucgr.B03689 Eucalyptus grandis HOM05D003595 ORTHO05D004132 4.4e-06 55.1 122 33.6
Nn2g15359 Nelumbo nucifera HOM05D003595 ORTHO05D004132 4.4e-06 55.1 58 44.8
Thecc.09G234200 Theobroma cacao HOM05D003595 ORTHO05D004132 4.4e-06 55.1 58 46.6
Nn7g36211 Nelumbo nucifera HOM05D003595 ORTHO05D004132 5.7e-06 54.7 105 34.3
CsaV3_4G024290 Cucumis sativus L. HOM05D003595 ORTHO05D004132 7.5e-06 54.3 54 46.3
MD11G1192700 Malus domestica HOM05D003595 ORTHO05D004132 7.5e-06 54.3 58 46.6
Potri.009G053000 Populus trichocarpa HOM05D003595 ORTHO05D004132 7.5e-06 54.3 58 44.8
CSS0007298 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 9.8e-06 53.9 113 38.1
Glyma.19G141300 Glycine max HOM05D003595 ORTHO05D004132 9.8e-06 53.9 56 46.4


User provided reference genes

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