Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.0e-106 390.2 210 100.0
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 6.6e-98 360.9 210 93.8
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 5.2e-95 351.3 212 91.0
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.2e-94 350.1 212 91.5
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.5e-94 349.7 213 91.5
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.5e-94 349.7 213 91.5
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.5e-94 349.7 213 91.5
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 3.4e-94 348.6 212 90.1
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 1.6e-88 329.7 209 89.0
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 8.0e-88 327.4 209 87.1
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 3.4e-86 322.0 209 87.1
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 3.5e-83 312.0 208 84.1
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.7e-77 293.1 198 82.8
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 2.4e-68 262.7 222 71.6
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.7e-66 256.5 213 72.8
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 3.0e-66 255.8 218 69.7
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 2.5e-65 252.7 197 72.6
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 3.3e-65 252.3 214 69.6
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 5.6e-65 251.5 202 70.8
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 7.3e-65 251.1 219 68.5
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 7.3e-65 251.1 219 68.5
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 9.6e-65 250.8 214 69.6
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 9.6e-65 250.8 214 69.6
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 9.6e-65 250.8 215 71.6
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 3.1e-63 245.7 216 69.9
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 5.2e-63 245.0 217 67.3
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 5.2e-63 245.0 217 67.3
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 6.8e-63 244.6 186 76.3
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 3.4e-62 242.3 178 75.3
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 4.4e-62 241.9 202 70.3
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 5.8e-62 241.5 223 64.1
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 1.7e-61 240.0 206 68.9
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-61 240.0 206 68.9
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.8e-61 238.8 203 68.5
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 3.8e-61 238.8 221 66.1
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 8.4e-61 237.7 202 69.3
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 1.1e-60 237.3 159 80.5
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 1.1e-60 237.3 219 64.8
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.4e-60 236.9 210 67.1
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.4e-60 236.9 206 68.4
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.4e-60 236.9 216 66.2
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.9e-60 236.5 206 68.0
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 3.2e-60 235.7 213 65.7
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 7.1e-60 234.6 150 83.3
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 7.1e-60 234.6 224 66.1
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 9.3e-60 234.2 177 72.9
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 1.2e-59 233.8 226 64.6
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.6e-59 233.4 213 66.7
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 6.0e-59 231.5 190 69.5
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 7.8e-59 231.1 189 69.3
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 7.8e-59 231.1 177 74.0
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.0e-58 230.7 209 65.6
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.3e-58 229.6 178 73.0
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 2.3e-58 229.6 225 65.3
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 3.0e-58 229.2 210 65.2
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 3.0e-58 229.2 204 65.7
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 3.0e-58 229.2 150 82.0
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 3.0e-58 229.2 190 69.5
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 3.9e-58 228.8 218 63.8
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 6.6e-58 228.0 218 62.4
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 6.6e-58 228.0 178 74.2
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.6e-58 228.0 178 74.2
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.5e-57 226.9 161 76.4
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 9.6e-57 224.2 159 76.7
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.3e-56 223.8 160 75.6
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.6e-56 223.4 213 65.3
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 2.8e-56 222.6 159 76.1
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 2.8e-56 222.6 137 86.9
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 3.6e-56 222.2 160 76.2
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 6.2e-56 221.5 194 67.5
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.1e-55 220.7 192 65.6
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.8e-55 219.9 222 62.2
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.8e-55 219.9 225 63.1
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 2.4e-55 219.5 147 81.0
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 3.1e-55 219.2 226 63.7
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 3.1e-55 219.2 180 69.4
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 6.9e-55 218.0 211 61.6
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 9.0e-55 217.6 180 71.1
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.2e-54 217.2 180 70.6
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 1.5e-54 216.9 162 77.2
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 2.6e-54 216.1 239 60.7
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 2.2e-53 213.0 164 72.0
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 7.1e-52 208.0 161 73.9
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 9.3e-52 207.6 204 62.3
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 4.6e-51 205.3 205 60.5
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 1.5e-49 200.3 178 62.9
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 2.5e-49 199.5 170 68.2
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 4.8e-48 195.3 131 77.9
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 5.3e-47 191.8 197 59.4
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 6.9e-47 191.4 159 63.5
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.7e-45 186.8 145 69.7
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.2e-43 180.6 131 77.1
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 4.3e-41 172.2 118 77.1
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 1.4e-39 167.2 164 61.6
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 1.2e-38 164.1 200 52.0
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 1.3e-37 160.6 106 81.1
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.4e-36 157.1 107 79.4
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 2.5e-36 156.4 231 49.8
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 1.0e-26 124.4 82 82.9
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 6.7e-26 121.7 82 81.7
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 4.5e-22 109.0 88 65.9
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 5.9e-22 108.6 214 37.4
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.0e-21 107.8 74 79.7
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 6.1e-19 98.6 102 58.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 3.9e-18 95.9 58 87.9
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 3.4e-14 82.8 112 41.1
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 3.9e-10 69.3 48 77.1
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 3.9e-10 69.3 107 43.0
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 6.7e-10 68.6 46 80.4
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 2.0e-09 67.0 103 35.9
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.5e-06 57.4 37 78.4


User provided reference genes

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