Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 9.1e-138 493.8 296 100.0
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 1.0e-112 410.6 299 77.6
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 1.7e-112 409.8 300 80.0
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 2.3e-112 409.5 299 79.3
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 2.3e-112 409.5 299 79.3
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 2.3e-112 409.5 299 79.3
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 4.3e-111 405.2 299 73.2
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.4e-109 400.2 297 85.9
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 4.0e-109 398.7 302 72.2
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 6.0e-105 384.8 298 84.2
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 3.9e-104 382.1 299 79.6
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 1.2e-97 360.5 300 77.7
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.4e-82 310.5 301 66.4
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.7e-67 260.4 277 59.6
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 1.4e-50 204.1 279 45.5
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 5.5e-50 202.2 272 45.6
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 9.4e-50 201.4 260 45.0
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 4.6e-49 199.1 277 46.2
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 7.9e-49 198.4 293 45.7
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 7.9e-49 198.4 292 44.9
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 3.0e-48 196.4 238 47.5
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 5.1e-48 195.7 271 43.5
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 8.8e-48 194.9 258 43.8
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 2.6e-47 193.4 243 46.5
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 3.3e-47 193.0 298 40.9
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 9.7e-47 191.4 272 43.8
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.3e-46 191.0 280 42.1
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 2.2e-46 190.3 239 45.6
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 2.2e-46 190.3 287 45.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 8.2e-46 188.3 149 63.1
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 8.2e-46 188.3 122 76.2
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.8e-45 187.2 248 44.4
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 1.8e-45 187.2 279 45.9
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.4e-45 186.8 237 46.8
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 2.4e-45 186.8 249 48.2
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.0e-44 183.7 185 53.0
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.0e-43 181.4 257 42.4
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 1.7e-43 180.6 218 50.0
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.7e-43 180.6 269 44.2
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 2.2e-43 180.3 178 58.4
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 3.8e-43 179.5 169 58.0
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 5.0e-43 179.1 231 44.6
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 6.5e-43 178.7 241 43.2
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 8.5e-43 178.3 129 68.2
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 1.1e-42 177.9 307 42.7
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.1e-42 177.9 152 59.2
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 2.5e-42 176.8 160 57.5
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 3.2e-42 176.4 136 62.5
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 5.5e-42 175.6 136 62.5
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 1.2e-41 174.5 175 60.0
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 1.2e-41 174.5 230 49.6
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 1.2e-41 174.5 129 65.1
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.1e-41 173.7 303 41.3
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 2.1e-41 173.7 306 39.2
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 3.6e-41 172.9 181 54.1
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 4.7e-41 172.6 159 56.0
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 4.7e-41 172.6 230 55.7
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 6.1e-41 172.2 237 56.1
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.9e-41 171.8 127 66.9
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.9e-41 171.8 235 55.7
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 6.7e-40 168.7 286 39.5
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 3.3e-39 166.4 302 38.7
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 4.4e-39 166.0 232 47.0
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 4.4e-39 166.0 226 45.6
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.3e-38 164.5 287 48.4
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.3e-38 164.5 229 46.3
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 1.7e-38 164.1 266 38.7
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 2.8e-38 163.3 133 58.6
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 1.4e-37 161.0 239 42.3
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 4.1e-37 159.5 129 62.0
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 2.6e-36 156.8 130 56.2
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 3.5e-36 156.4 225 47.6
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 7.7e-36 155.2 229 40.2
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 7.7e-36 155.2 220 48.2
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.7e-35 154.1 129 59.7
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 2.2e-35 153.7 158 49.4
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.8e-35 152.9 117 66.7
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 5.0e-35 152.5 126 58.7
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.0e-32 144.8 241 39.4
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 1.8e-32 144.1 130 55.4
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 8.8e-32 141.7 113 65.5
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 6.3e-30 135.6 133 51.9
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.4e-29 134.4 245 37.1
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 5.3e-29 132.5 127 52.8
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.6e-28 131.0 131 50.4
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.0e-27 128.3 299 36.5
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 2.5e-26 123.6 125 52.0
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 8.0e-25 118.6 141 46.8
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 1.0e-24 118.2 229 34.5
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 6.8e-24 115.5 130 46.9
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 9.8e-23 111.7 91 61.5
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 9.1e-21 105.1 113 48.7
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.3e-19 100.5 194 37.1
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 1.1e-18 98.2 123 46.3
Aa31sc1417G10 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.8e-17 93.6 92 56.5
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 5.7e-15 85.9 65 70.8
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 3.8e-11 73.2 46 69.6
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 6.6e-11 72.4 46 69.6
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 8.6e-11 72.0 35 85.7
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.2e-07 61.6 45 64.4
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.6e-07 60.5 44 61.4


User provided reference genes

Program Settings