Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 7.1e-94 347.4 198 100.0
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 2.1e-66 256.1 200 79.0
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 6.9e-65 251.1 198 77.8
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 4.5e-64 248.4 198 74.7
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 4.2e-62 241.9 199 76.9
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 5.1e-60 235.0 202 77.2
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 1.3e-58 230.3 202 77.2
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 1.3e-58 230.3 202 77.2
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 1.4e-57 226.9 200 75.5
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 3.4e-56 222.2 203 74.9
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 3.4e-56 222.2 203 74.9
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 1.0e-55 220.7 202 73.3
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 1.0e-55 220.7 202 73.3
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 5.1e-52 208.4 198 71.7
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 5.1e-52 208.4 198 71.2
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 2.8e-50 202.6 198 70.2
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 8.2e-50 201.1 198 70.2
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 8.2e-50 201.1 198 70.2
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 1.2e-16 90.9 198 38.9
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 2.7e-16 89.7 199 39.2
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 5.9e-16 88.6 199 39.2
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 5.9e-16 88.6 199 39.2
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 3.8e-15 85.9 199 38.2
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 5.0e-15 85.5 199 38.2
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 5.0e-15 85.5 199 38.2
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 1.1e-14 84.3 199 38.2
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 1.1e-14 84.3 199 38.2
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 1.1e-14 84.3 199 38.2
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 3.2e-14 82.8 199 39.2
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 3.2e-14 82.8 197 36.0
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 5.5e-14 82.0 199 38.7
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 5.5e-14 82.0 199 36.7
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 9.4e-14 81.3 201 31.8
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 8.0e-13 78.2 199 38.7
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 8.0e-13 78.2 199 38.7
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 8.0e-13 78.2 199 38.7
THA.LOC104816923 Tarenaya hassleriana HOM05D010922 ORTHO05D011067 1.0e-12 77.8 201 37.3
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 1.8e-12 77.0 200 32.5
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 5.2e-12 75.5 199 38.2
Aa31LG8G7360 Aethionema arabicum HOM05D010509 ORTHO05D011067 6.8e-12 75.1 199 36.7
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 3.4e-11 72.8 200 34.5
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 5.7e-11 72.0 210 34.8
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 9.8e-11 71.2 205 31.7
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 2.8e-10 69.7 205 31.7
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 8.3e-10 68.2 200 32.0
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 1.1e-09 67.8 205 31.2
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 1.4e-09 67.4 200 30.0
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 2.4e-09 66.6 200 31.5
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 1.2e-08 64.3 198 29.3
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 2.7e-08 63.2 205 31.2
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 3.5e-08 62.8 207 32.4
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.9e-07 59.7 217 32.3
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 5.6e-06 55.5 205 30.2


User provided reference genes

Program Settings