Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 0.0e+00 1279.2 629 100.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 4.3e-310 1067.4 635 83.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.6e-309 1065.4 632 83.7
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.2e-307 1059.3 636 83.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.2e-307 1059.3 636 83.0
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 3.4e-299 1031.2 632 81.8
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 7.5e-299 1030.0 635 81.3
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 6.6e-295 1016.9 633 80.9
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.9e-289 998.8 627 79.4
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 9.5e-286 986.5 636 79.6
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 6.8e-284 980.3 622 78.6
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 8.9e-284 979.9 634 79.2
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 4.2e-273 944.5 642 73.8
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 4.9e-258 894.4 624 71.5
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 7.9e-256 887.1 598 72.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.3e-254 881.3 586 72.9
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 9.6e-254 880.2 586 72.7
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.6e-253 879.4 655 68.4
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.4e-252 875.5 586 72.2
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.2e-251 873.2 594 71.5
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.0e-250 870.2 592 70.6
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.7e-250 869.4 594 71.2
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.6e-248 862.8 636 67.6
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.6e-248 862.8 589 71.3
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 2.1e-248 862.4 586 71.5
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.7e-248 862.1 594 70.0
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.5e-248 861.7 588 70.9
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.3e-247 859.8 594 70.0
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.1e-247 857.8 582 71.1
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 3.3e-246 855.1 585 70.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 7.4e-246 854.0 582 70.4
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.6e-245 852.8 585 70.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.1e-245 852.4 611 69.1
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 2.8e-245 852.0 593 70.7
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.8e-244 849.4 634 67.2
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 4.1e-244 848.2 598 70.4
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 6.9e-244 847.4 588 70.4
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 6.9e-244 847.4 585 69.9
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 3.4e-243 845.1 594 69.4
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 2.2e-242 842.4 596 67.8
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.8e-242 841.6 592 68.4
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 3.8e-242 841.6 597 69.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.5e-242 840.9 585 69.6
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 8.5e-242 840.5 634 66.4
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.1e-241 840.1 646 65.2
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.4e-241 839.7 588 68.5
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.9e-241 839.3 659 64.0
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.2e-240 836.6 588 68.2
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.2e-240 836.6 577 69.8
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.1e-240 835.9 595 68.7
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.1e-240 835.9 584 70.4
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.6e-240 835.1 588 69.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 3.6e-240 835.1 611 66.6
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.3e-239 833.2 595 68.6
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.0e-239 832.0 590 68.3
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 8.7e-239 830.5 586 68.8
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.9e-238 829.3 597 67.8
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.5e-238 828.9 584 68.8
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 4.3e-238 828.2 708 59.7
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 7.4e-238 827.4 592 68.1
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.8e-237 825.5 586 68.4
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 6.3e-237 824.3 632 65.5
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.8e-236 822.8 596 67.1
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 2.0e-235 819.3 592 67.4
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 2.0e-235 819.3 583 68.4
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 4.5e-235 818.1 585 68.0
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 2.9e-234 815.5 581 68.7
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 3.8e-234 815.1 584 67.5
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.0e-234 814.7 638 64.3
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 6.5e-234 814.3 583 68.8
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.5e-233 812.4 640 64.2
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 9.4e-233 810.4 638 64.1
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.6e-232 808.5 640 64.1
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.0e-231 807.0 589 66.9
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 2.3e-231 805.8 588 66.5
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 2.3e-231 805.8 550 70.7
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.1e-230 803.5 589 66.6
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 6.3e-229 797.7 527 76.9
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 8.2e-229 797.3 592 65.4
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.4e-227 792.0 582 66.7
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.9e-225 786.2 591 65.3
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 2.5e-225 785.8 581 65.9
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 4.2e-225 785.0 587 65.4
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.2e-224 783.5 592 64.0
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 5.9e-219 764.6 595 65.9
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.7e-218 763.1 636 60.1
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.1e-217 760.4 564 66.1
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.2e-217 758.4 584 63.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 1.2e-216 756.9 578 66.1
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 4.5e-211 738.4 546 65.9
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 2.4e-204 716.1 580 60.9
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.0e-199 700.7 575 62.1
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.6e-192 676.8 584 59.2
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.5e-187 659.1 628 56.4
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.0e-183 647.5 585 54.5
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.8e-182 641.7 581 57.1
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 2.0e-179 633.3 562 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 1.7e-173 613.6 593 53.3
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 7.8e-171 604.7 601 52.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 2.9e-165 586.3 578 51.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.4e-143 514.2 381 64.6
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.1e-127 459.9 521 50.3
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 7.2e-116 422.2 253 75.9
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.0e-90 338.6 211 74.9
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 4.3e-76 290.0 193 72.5
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 4.0e-58 230.3 220 55.5
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 9.9e-57 225.7 107 97.2
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.1e-47 195.7 203 49.8
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 8.1e-27 126.3 112 52.7
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 3.1e-26 124.4 140 51.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.2e-25 122.5 80 71.2
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 6.4e-24 116.7 65 76.9
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 3.0e-21 107.8 65 70.8
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 4.2e-15 87.4 73 61.6
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 6.7e-13 80.1 37 91.9
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 6.7e-13 80.1 43 81.4
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.6e-09 68.2 39 74.4
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 5.5e-07 60.5 131 35.9
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 1.6e-06 58.9 67 52.2


User provided reference genes

Program Settings