Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g37100 Schrenkiella parvula HOM05D003778 ORTHO05D004418 0.0e+00 1159.8 562 100.0
BraA06t23537Z Brassica rapa HOM05D003778 ORTHO05D004418 0.0e+00 1122.1 562 95.9
A06p03260 Brassica napus HOM05D003778 ORTHO05D004418 0.0e+00 1121.3 562 95.9
BolC6t35641H Brassica oleracea HOM05D003778 ORTHO05D004418 0.0e+00 1116.3 562 95.6
THA.LOC104804923 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 9.4e-309 1062.8 562 89.7
Thhalv10020412m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 1.8e-307 1058.5 562 88.8
BcaC08g43211 Brassica carinata HOM05D003778 ORTHO05D004418 1.1e-306 1055.8 562 91.3
BraA05t21813Z Brassica rapa HOM05D003778 ORTHO05D004418 2.5e-306 1054.7 562 88.8
BcaC05g28402 Brassica carinata HOM05D003778 ORTHO05D004418 5.7e-306 1053.5 562 88.6
A05p29300 Brassica napus HOM05D003778 ORTHO05D004418 5.7e-306 1053.5 562 88.6
C05p44820 Brassica napus HOM05D003778 ORTHO05D004418 5.7e-306 1053.5 562 88.6
BolC5t33208H Brassica oleracea HOM05D003778 ORTHO05D004418 5.7e-306 1053.5 562 88.6
Carub.0003s1970 Capsella rubella HOM05D003778 ORTHO05D004418 7.4e-306 1053.1 562 88.1
AL3G33330 Arabidopsis lyrata HOM05D003778 ORTHO05D004418 4.8e-305 1050.4 562 87.7
C06p05320 Brassica napus HOM05D003778 ORTHO05D004418 8.2e-305 1049.7 521 96.2
BcaB06g26051 Brassica carinata HOM05D003778 ORTHO05D004418 4.1e-304 1047.3 562 87.4
Sp3g17830 Schrenkiella parvula HOM05D003778 ORTHO05D004418 4.1e-304 1047.3 562 87.7
A01p34930 Brassica napus HOM05D003778 ORTHO05D004418 2.0e-303 1045.0 562 87.7
CARHR095330 Cardamine hirsuta HOM05D003778 ORTHO05D004418 2.0e-303 1045.0 562 87.4
AT3G19820 Arabidopsis thaliana HOM05D003778 ORTHO05D004418 2.6e-303 1044.6 562 87.4
Aa31LG8G6590 Aethionema arabicum HOM05D003778 ORTHO05D004418 3.4e-303 1044.3 562 87.5
C01p44340 Brassica napus HOM05D003778 ORTHO05D004418 4.5e-303 1043.9 562 87.7
BolC1t04399H Brassica oleracea HOM05D003778 ORTHO05D004418 4.5e-303 1043.9 562 87.7
BraA01t03576Z Brassica rapa HOM05D003778 ORTHO05D004418 1.7e-302 1042.0 562 87.4
THA.LOC104815230 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 7.2e-293 1010.0 562 84.2
CANSAT78G1874 Cannabis sativa HOM05D003778 ORTHO05D004418 6.1e-292 1006.9 564 84.8
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea HOM05D003778 ORTHO05D004418 2.6e-290 1001.5 561 85.6
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea HOM05D003778 ORTHO05D004418 3.3e-290 1001.1 564 85.5
Glyma.11G103500 Glycine max HOM05D003778 ORTHO05D004418 3.7e-289 997.7 564 84.9
VMungo1127G1615 Vigna mungo HOM05D003778 ORTHO05D004418 6.3e-289 996.9 564 85.1
Lj3g0022719 Lotus japonicus HOM05D003778 ORTHO05D004418 1.1e-288 996.1 564 84.6
COL.COLO4_27669 Corchorus olitorius HOM05D003778 ORTHO05D004418 1.8e-288 995.3 564 84.4
Gohir.A13G026100 Gossypium hirsutum HOM05D003778 ORTHO05D004418 2.4e-288 995.0 565 84.2
Potri.008G084800 Populus trichocarpa HOM05D003778 ORTHO05D004418 4.1e-288 994.2 562 83.8
Potri.010G170000 Populus trichocarpa HOM05D003778 ORTHO05D004418 9.1e-288 993.0 562 83.3
PGR004G0624 Punica granatum HOM05D003778 ORTHO05D004418 9.1e-288 993.0 565 82.8
Haze_11725 Corylus avellana HOM05D003778 ORTHO05D004418 2.0e-287 991.9 564 83.2
Gohir.D13G024700 Gossypium hirsutum HOM05D003778 ORTHO05D004418 7.7e-287 989.9 565 84.1
Sabra08G0063000 Salix brachista HOM05D003778 ORTHO05D004418 7.7e-287 989.9 565 82.8
Lalb_Chr01g0001531 Lupinus albus HOM05D003778 ORTHO05D004418 1.7e-286 988.8 564 84.6
Gorai.013G027900 Gossypium raimondii HOM05D003778 ORTHO05D004418 2.9e-286 988.0 565 83.9
Phvul.011G031700 Phaseolus vulgaris HOM05D003778 ORTHO05D004418 3.8e-286 987.6 564 83.7
TWI74G0502 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 1.1e-285 986.1 564 83.7
Dinv17604 Davidia involucrata HOM05D003778 ORTHO05D004418 1.9e-285 985.3 564 83.2
SalBow8G3862 Salvia bowleyana HOM05D003778 ORTHO05D004418 2.5e-285 984.9 565 83.4
Sabra10G0129800 Salix brachista HOM05D003778 ORTHO05D004418 5.5e-285 983.8 562 82.7
Sc06g0007850 Simmondsia chinensis HOM05D003778 ORTHO05D004418 5.5e-285 983.8 564 83.9
Atru.chr11.1231 Acer truncatum HOM05D003778 ORTHO05D004418 9.4e-285 983.0 564 82.3
Atru.chr11.1319 Acer truncatum HOM05D003778 ORTHO05D004418 9.4e-285 983.0 564 82.3
SalBow2G0375 Salvia bowleyana HOM05D003778 ORTHO05D004418 1.6e-284 982.2 565 83.2
Actinidia04080 Actinidia chinensis HOM05D003778 ORTHO05D004418 2.1e-284 981.9 564 83.0
CiPaw.06G057600 Carya illinoinensis HOM05D003778 ORTHO05D004418 2.7e-284 981.5 564 82.8
SGA_v2.0_scaffold223G42894 Striga asiatica HOM05D003778 ORTHO05D004418 2.7e-284 981.5 558 83.9
Lalb_Chr03g0024881 Lupinus albus HOM05D003778 ORTHO05D004418 3.6e-284 981.1 564 83.5
QL03p043582 Quercus lobata HOM05D003778 ORTHO05D004418 1.4e-283 979.2 564 82.3
Thecc.02G311500 Theobroma cacao HOM05D003778 ORTHO05D004418 1.4e-283 979.2 564 83.2
Migut.M01947 Erythranthe guttata HOM05D003778 ORTHO05D004418 1.8e-283 978.8 562 82.9
Psat7g174000 Pisum sativum HOM05D003778 ORTHO05D004418 1.8e-283 978.8 564 83.0
TAR035G0003 Trochodendron aralioides HOM05D003778 ORTHO05D004418 2.3e-283 978.4 564 82.4
TAR629G2113 Trochodendron aralioides HOM05D003778 ORTHO05D004418 6.8e-283 976.9 564 82.3
TWI77G0069 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 8.8e-283 976.5 564 81.9
Rhsim09G0073500 Rhododendron simsii HOM05D003778 ORTHO05D004418 1.5e-282 975.7 564 83.2
Eucgr.J00851 Eucalyptus grandis HOM05D003778 ORTHO05D004418 2.0e-282 975.3 564 82.3
TPR.G21559 Trifolium pratense HOM05D003778 ORTHO05D004418 2.0e-282 975.3 564 82.8
DCAR_030405 Daucus carota HOM05D003778 ORTHO05D004418 2.6e-282 974.9 564 82.8
Medtr4g074350 Medicago truncatula HOM05D003778 ORTHO05D004418 4.4e-282 974.2 564 82.3
Aqoxy3G04278 Aquilegia oxysepala HOM05D003778 ORTHO05D004418 9.7e-282 973.0 561 81.8
Duzib248G0532 Durio zibethinus HOM05D003778 ORTHO05D004418 1.7e-281 972.2 565 82.5
Lj6A722T93 Lonicera japonica HOM05D003778 ORTHO05D004418 1.7e-281 972.2 567 82.2
Ca_03035_v3 Cicer arietinum L. HOM05D003778 ORTHO05D004418 2.8e-281 971.5 564 82.4
vmacro00468 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 2.8e-281 971.5 564 82.1
Rhsim09G0073400 Rhododendron simsii HOM05D003778 ORTHO05D004418 4.8e-281 970.7 564 82.8
PSO017G4886 Papaver somniferum HOM05D003778 ORTHO05D004418 8.3e-281 969.9 565 81.8
PSO478G4461 Papaver somniferum HOM05D003778 ORTHO05D004418 8.3e-281 969.9 565 81.8
MSTRG.16322 Avicennia marina HOM05D003778 ORTHO05D004418 1.1e-280 969.5 565 82.8
Ciclev10030984m.g Citrus clementina HOM05D003778 ORTHO05D004418 1.4e-280 969.1 564 81.9
DCAR_002565 Daucus carota HOM05D003778 ORTHO05D004418 1.4e-280 969.1 564 82.1
ECA233G5967 Erigeron canadensis HOM05D003778 ORTHO05D004418 5.3e-280 967.2 563 81.5
Manes.03G081200 Manihot esculenta HOM05D003778 ORTHO05D004418 1.2e-279 966.1 562 81.7
CSS0038233 Camellia sinensis var. sinensis HOM05D003778 ORTHO05D004418 2.0e-279 965.3 564 81.7
Cc09_g06490 Coffea canephora HOM05D003778 ORTHO05D004418 1.0e-278 963.0 562 81.9
HanXRQChr13g0388101 Helianthus annuus HOM05D003778 ORTHO05D004418 1.3e-278 962.6 563 80.8
ECA234G2331 Erigeron canadensis HOM05D003778 ORTHO05D004418 6.5e-278 960.3 556 81.5
ClCG09G004610 Citrullus lanatus HOM05D003778 ORTHO05D004418 1.1e-277 959.5 564 80.5
CAN.G79.46 Capsicum annuum HOM05D003778 ORTHO05D004418 1.2e-276 956.1 564 80.7
MBI03_g24012_MAGBIO Magnolia biondii HOM05D003778 ORTHO05D004418 1.6e-276 955.7 564 81.0
SEGI_38803 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 2.1e-276 955.3 564 79.4
Os10g0397400 Oryza sativa ssp. japonica HOM05D003778 ORTHO05D004418 4.7e-276 954.1 559 80.3
Ah.01g001630 Amaranthus hybridus HOM05D003778 ORTHO05D004418 8.0e-276 953.4 551 82.2
Prupe.1G345300 Prunus persica HOM05D003778 ORTHO05D004418 1.4e-275 952.6 564 80.3
HanXRQChr01g0028571 Helianthus annuus HOM05D003778 ORTHO05D004418 2.3e-275 951.8 559 80.5
ATR0618G344 Amborella trichopoda HOM05D003778 ORTHO05D004418 4.0e-275 951.0 564 79.3
Lsat_1_v5_gn_4_26521 Lactuca sativa HOM05D003778 ORTHO05D004418 4.0e-275 951.0 564 80.0
Nitab4.5_0000265g0030 Nicotiana tabacum HOM05D003778 ORTHO05D004418 8.8e-275 949.9 564 80.1
Zm00001eb228910 Zea mays HOM05D003778 ORTHO05D004418 1.2e-274 949.5 559 80.0
CDE05G2073 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 1.5e-274 949.1 563 80.1
MELO3C023603.2 Cucumis melo HOM05D003778 ORTHO05D004418 1.5e-274 949.1 564 78.4
Lsat_1_v5_gn_8_32421 Lactuca sativa HOM05D003778 ORTHO05D004418 2.6e-274 948.3 563 79.8
Lj6g0014800 Lotus japonicus HOM05D003778 ORTHO05D004418 4.4e-274 947.6 564 80.7
MD13G1007700 Malus domestica HOM05D003778 ORTHO05D004418 1.3e-273 946.0 564 79.8
MD16G1000400 Malus domestica HOM05D003778 ORTHO05D004418 1.3e-273 946.0 564 79.4
Hund24279 Selenicereus undatus HOM05D003778 ORTHO05D004418 6.3e-273 943.7 551 81.3
CsaV3_7G030530 Cucumis sativus L. HOM05D003778 ORTHO05D004418 1.8e-272 942.2 564 77.8
AUR62017664 Chenopodium quinoa HOM05D003778 ORTHO05D004418 9.1e-272 939.9 550 80.7
Sopen02g009490 Solanum pennellii HOM05D003778 ORTHO05D004418 9.1e-272 939.9 551 80.4
PGSC0003DMG400011801 Solanum tuberosum HOM05D003778 ORTHO05D004418 3.5e-271 937.9 553 79.9
AUR62015201 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.5e-271 937.6 550 80.7
Sed0012416 Sechium edule HOM05D003778 ORTHO05D004418 1.0e-270 936.4 562 78.6
FvH4_4g36730 Fragaria vesca HOM05D003778 ORTHO05D004418 2.9e-270 934.9 566 79.7
RcHm_v2.0_Chr4g0446441 Rosa chinensis HOM05D003778 ORTHO05D004418 3.8e-270 934.5 568 78.9
Peaxi162Scf01123g00017 Petunia axillaris HOM05D003778 ORTHO05D004418 5.0e-270 934.1 563 78.9
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 6.6e-270 933.7 566 79.5
Lj6g0026630 Lotus japonicus HOM05D003778 ORTHO05D004418 8.6e-270 933.3 561 79.9
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 3.3e-269 931.4 566 79.3
CsaV3_4G009240 Cucumis sativus L. HOM05D003778 ORTHO05D004418 4.0e-267 924.5 564 76.4
ClCG07G016390 Citrullus lanatus HOM05D003778 ORTHO05D004418 8.9e-267 923.3 564 76.6
Solyc02g030170.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 5.7e-266 920.6 534 81.1
EL10Ac9g22920 Beta vulgaris HOM05D003778 ORTHO05D004418 7.5e-266 920.2 566 78.1
Sed0007506 Sechium edule HOM05D003778 ORTHO05D004418 1.1e-264 916.4 564 75.5
Nitab4.5_0001219g0170 Nicotiana tabacum HOM05D003778 ORTHO05D004418 4.1e-264 914.4 564 77.1
Nitab4.5_0008761g0020 Nicotiana tabacum HOM05D003778 ORTHO05D004418 9.2e-264 913.3 564 77.1
Peaxi162Scf00833g00024 Petunia axillaris HOM05D003778 ORTHO05D004418 6.8e-259 897.1 552 76.4
Solyc02g069490.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 1.3e-257 892.9 565 74.7
Sopen02g018630 Solanum pennellii HOM05D003778 ORTHO05D004418 1.1e-256 889.8 554 75.6
PGSC0003DMG400021142 Solanum tuberosum HOM05D003778 ORTHO05D004418 4.1e-256 887.9 554 75.1
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 2.7e-255 885.2 564 77.1
CAN.G1362.14 Capsicum annuum HOM05D003778 ORTHO05D004418 6.6e-254 880.6 564 72.3
CAN.G675.20 Capsicum annuum HOM05D003778 ORTHO05D004418 3.3e-253 878.2 553 75.2
SMO367G0245 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 3.3e-253 878.2 564 74.1
HanXRQChr15g0483641 Helianthus annuus HOM05D003778 ORTHO05D004418 8.3e-249 863.6 570 71.2
Pp3c7_650 Physcomitrium patens HOM05D003778 ORTHO05D004418 9.2e-248 860.1 564 72.3
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis HOM05D003778 ORTHO05D004418 8.6e-246 853.6 563 71.6
Mapoly0190s0010 Marchantia polymorpha HOM05D003778 ORTHO05D004418 6.2e-244 847.4 564 71.6
Lsat_1_v5_gn_3_32901 Lactuca sativa HOM05D003778 ORTHO05D004418 3.4e-242 841.6 561 71.3
Peaxi162Scf00695g00218 Petunia axillaris HOM05D003778 ORTHO05D004418 2.7e-239 832.0 565 71.0
Peaxi162Scf00312g00221 Petunia axillaris HOM05D003778 ORTHO05D004418 1.2e-236 823.2 565 70.4
Pp3c11_26120 Physcomitrium patens HOM05D003778 ORTHO05D004418 6.8e-235 817.4 564 69.0
unitig_748.g7356 Utricularia gibba HOM05D003778 ORTHO05D004418 6.8e-235 817.4 558 73.3
MELO3C022613.2 Cucumis melo HOM05D003778 ORTHO05D004418 6.6e-230 800.8 468 78.6
Glyma.12G028300 Glycine max HOM05D003778 ORTHO05D004418 6.2e-212 741.1 419 85.7
AUR62018172 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.0e-198 697.2 425 77.4
GSVIVG01010184001 Vitis vinifera HOM05D003778 ORTHO05D004418 6.7e-198 694.5 562 63.7
Oeu008711.1 Olea europaea HOM05D003778 ORTHO05D004418 2.0e-194 682.9 561 61.9
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.5e-176 622.9 373 77.2
Mapoly0153s0024 Marchantia polymorpha HOM05D003778 ORTHO05D004418 8.2e-172 607.8 545 53.9
SEGI_20352 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 1.9e-160 570.1 519 51.1
CDE05G2099 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 2.7e-159 566.2 330 79.4
vmacro10903 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 1.7e-156 557.0 418 67.9
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis HOM05D003778 ORTHO05D004418 2.0e-154 550.1 488 51.6
Nn4g24924 Nelumbo nucifera HOM05D003778 ORTHO05D004418 2.9e-148 529.6 293 81.9
SMO347G0448 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 7.0e-139 498.4 418 56.2
Zm00001eb190720 Zea mays HOM05D003778 ORTHO05D004418 8.3e-132 474.9 315 71.7
Nitab4.5_0012697g0010 Nicotiana tabacum HOM05D003778 ORTHO05D004418 1.6e-130 470.7 561 48.1
Nitab4.5_0000876g0110 Nicotiana tabacum HOM05D003778 ORTHO05D004418 3.0e-129 466.5 561 48.0
CDE05G1908 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 1.2e-122 444.5 466 53.2
C06p05360 Brassica napus HOM05D003778 ORTHO05D004418 2.9e-108 396.7 546 45.2
Thhalv10012112m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 3.8e-100 369.8 214 84.6
CBR_g45591 Chara braunii HOM05D003778 ORTHO05D004418 1.1e-80 305.1 489 35.6
BcaC08g43207 Brassica carinata HOM05D003778 ORTHO05D004418 1.6e-79 301.2 154 91.6
BolC6t35639H Brassica oleracea HOM05D003778 ORTHO05D004418 1.4e-78 298.1 154 90.9
BcaB04g19062 Brassica carinata HOM05D003778 ORTHO05D004418 1.6e-66 258.1 166 73.5
vmacro10902 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 5.5e-51 206.5 117 83.8
GSVIVG01028580001 Vitis vinifera HOM05D003778 ORTHO05D004418 3.7e-47 193.7 133 74.4
GSVIVG01002973001 Vitis vinifera HOM05D003778 ORTHO05D004418 6.5e-44 183.0 128 73.4
C03p50700 Brassica napus HOM05D003778 ORTHO05D004418 5.5e-43 179.9 166 58.4
Zm00001eb190730 Zea mays HOM05D003778 ORTHO05D004418 5.5e-43 179.9 128 66.4
C03p50680 Brassica napus HOM05D003778 ORTHO05D004418 2.1e-42 177.9 166 58.4
BolC3t17357H Brassica oleracea HOM05D003778 ORTHO05D004418 3.6e-42 177.2 166 58.4
BolC3t17355H Brassica oleracea HOM05D003778 ORTHO05D004418 4.0e-41 173.7 166 57.8
Cfa024211 Carpinus fangiana HOM05D003778 ORTHO05D004418 5.6e-35 153.3 314 30.6
A03p41410 Brassica napus HOM05D003778 ORTHO05D004418 1.7e-31 141.7 210 41.9
Cfa023151 Carpinus fangiana HOM05D003778 ORTHO05D004418 1.8e-30 138.3 493 25.2
PGSC0003DMG400004305 Solanum tuberosum HOM05D003778 ORTHO05D004418 4.1e-30 137.1 90 70.0
Gorai.005G150900 Gossypium raimondii HOM05D003778 ORTHO05D004418 1.6e-29 135.2 87 70.1
BcaC01g03602 Brassica carinata HOM05D003778 ORTHO05D004418 4.7e-26 123.6 181 45.3
C06p05290 Brassica napus HOM05D003778 ORTHO05D033430 3.4e-24 117.5 59 84.7
HanXRQChr08g0230901 Helianthus annuus HOM05D003778 ORTHO05D004418 4.4e-24 117.1 76 67.1
GSVIVG01033182001 Vitis vinifera HOM05D003778 ORTHO05D008307 6.4e-23 113.2 85 61.2
A03p41420 Brassica napus HOM05D003778 ORTHO05D004418 1.0e-20 105.9 166 41.0
BraA03t13295Z Brassica rapa HOM05D003778 ORTHO05D004418 1.3e-12 79.0 46 71.7
C03p50690 Brassica napus HOM05D003778 ORTHO05D004418 6.4e-07 60.1 32 84.4
BolC3t17356H Brassica oleracea HOM05D003778 ORTHO05D004418 6.4e-07 60.1 32 84.4
C03p50670 Brassica napus HOM05D003778 ORTHO05D004418 2.4e-06 58.2 32 81.2


User provided reference genes

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