Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 9.7e-164 580.1 295 100.0
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 9.7e-164 580.1 295 100.0
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 1.8e-149 532.7 296 90.5
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 6.7e-149 530.8 296 91.2
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 1.5e-148 529.6 303 89.4
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 7.4e-148 527.3 296 90.5
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.7e-147 526.2 295 89.2
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.4e-146 523.1 304 89.1
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 3.4e-145 518.5 304 88.2
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 5.0e-144 514.6 303 89.1
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.6e-142 509.6 306 87.9
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.7e-123 445.3 292 78.1
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 5.9e-121 438.0 293 77.5
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.3e-120 436.0 233 92.7
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 8.0e-110 401.0 219 91.8
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.3e-107 393.7 288 70.8
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 3.7e-107 392.1 292 67.1
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.9e-106 389.8 284 68.0
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 2.4e-106 389.4 292 67.8
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 4.1e-106 388.7 295 66.1
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 1.2e-105 387.1 292 68.2
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 3.5e-105 385.6 293 67.6
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 7.8e-105 384.4 277 67.9
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.7e-104 383.3 288 66.3
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 1.7e-104 383.3 267 70.4
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 1.7e-104 383.3 293 66.6
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 3.9e-104 382.1 275 68.7
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 5.6e-103 378.3 278 66.5
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 5.6e-103 378.3 278 66.5
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 7.3e-103 377.9 277 66.8
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.6e-102 376.7 286 65.7
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 3.6e-102 375.6 290 65.2
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 6.2e-102 374.8 293 65.5
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 1.1e-101 374.0 300 64.7
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.1e-101 374.0 267 68.9
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 4.0e-101 372.1 268 69.4
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 4.0e-101 372.1 274 66.1
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 6.8e-101 371.3 251 71.3
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 8.9e-101 370.9 287 66.6
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.5e-100 370.2 291 65.3
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.0e-100 369.8 293 63.1
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 5.8e-100 368.2 278 66.2
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 5.8e-100 368.2 293 64.5
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 7.5e-100 367.9 273 65.9
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 9.8e-100 367.5 291 63.9
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 3.7e-99 365.5 250 71.2
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 4.9e-99 365.2 208 87.5
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 6.4e-99 364.8 287 64.5
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 8.3e-99 364.4 294 62.9
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 8.3e-99 364.4 251 70.5
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 1.9e-98 363.2 287 63.8
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 3.2e-98 362.5 274 66.4
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 4.1e-98 362.1 275 66.9
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 1.2e-97 360.5 302 60.6
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 3.5e-97 359.0 283 64.3
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 3.5e-97 359.0 285 63.5
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 3.0e-96 355.9 293 63.1
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 5.1e-96 355.1 279 64.5
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 1.1e-95 354.0 254 67.3
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 1.9e-95 353.2 325 56.6
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 1.2e-94 350.5 294 61.6
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 1.6e-94 350.1 230 71.3
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 2.1e-94 349.7 293 63.1
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.1e-94 349.7 230 72.6
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 3.6e-94 349.0 231 72.7
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 3.6e-94 349.0 295 61.0
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 1.8e-93 346.7 231 72.3
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 2.3e-93 346.3 230 72.6
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 2.3e-93 346.3 306 60.8
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 3.1e-93 345.9 253 66.0
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 2.0e-92 343.2 261 65.9
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 3.4e-92 342.4 247 66.8
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.3e-91 340.5 274 64.2
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 2.9e-91 339.3 228 70.6
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 6.4e-91 338.2 262 64.9
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 5.1e-88 328.6 229 68.1
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 8.6e-88 327.8 280 58.6
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 8.6e-88 327.8 304 55.6
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.5e-87 327.0 294 59.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.3e-87 325.9 249 65.1
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 9.5e-87 324.3 287 59.2
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 2.8e-86 322.8 255 62.0
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 1.2e-84 317.4 292 56.8
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 2.6e-84 316.2 252 61.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 8.4e-83 311.2 217 70.0
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.3e-80 303.9 203 72.4
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 3.6e-78 295.8 228 64.5
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 1.1e-77 294.3 205 69.3
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.4e-76 289.3 166 86.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.1e-74 284.3 265 58.1
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 2.7e-73 279.6 204 69.1
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.3e-72 276.6 245 56.3
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 4.2e-66 255.8 185 66.5
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 7.1e-66 255.0 248 50.8
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.2e-65 254.2 183 66.1
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 1.3e-64 250.8 272 46.7
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 8.7e-64 248.1 211 61.1
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.1e-63 247.7 293 48.1
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 2.6e-60 236.5 262 47.7
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.6e-60 236.5 221 57.9
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 7.6e-60 235.0 247 49.8
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.5e-47 193.4 276 40.9
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 5.7e-47 192.2 134 70.9
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.1e-45 188.0 287 43.6
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.4e-42 177.6 102 89.2
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.6e-33 147.5 172 45.9
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.5e-31 141.0 105 61.9
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 3.6e-25 119.8 101 55.4
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 1.1e-23 114.8 299 32.1
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 2.8e-22 110.2 332 28.9
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 3.7e-14 83.2 102 44.1
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 3.7e-14 83.2 102 44.1
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 5.9e-12 75.9 51 72.5
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 5.9e-12 75.9 137 42.3
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 7.7e-12 75.5 48 75.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.0e-11 75.1 51 70.6
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.0e-11 75.1 51 70.6
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 3.8e-11 73.2 251 25.5
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 1.1e-10 71.6 107 45.8
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 6.8e-08 62.4 52 63.5


User provided reference genes

Program Settings