Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.7e-60 234.2 130 100.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.0e-56 223.4 130 93.8
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 4.0e-53 211.5 130 88.5
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 8.9e-53 210.3 130 86.9
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 1.2e-52 209.9 130 88.5
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.1e-42 176.8 131 80.2
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.4e-42 176.4 131 80.2
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 9.2e-42 173.7 131 79.4
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 9.2e-42 173.7 131 79.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 9.5e-39 163.7 131 77.1
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.1e-37 160.2 133 71.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.3e-35 153.3 132 65.2
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.7e-35 152.9 160 64.4
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 2.4e-34 149.1 141 64.5
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 2.7e-33 145.6 135 62.2
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.5e-33 145.2 133 60.9
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 4.6e-33 144.8 132 65.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 2.3e-32 142.5 135 64.4
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 3.0e-32 142.1 140 62.1
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.1e-31 140.2 130 59.2
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 1.5e-31 139.8 136 57.4
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 4.7e-30 134.8 133 59.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 6.2e-30 134.4 135 59.3
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 6.2e-30 134.4 135 57.8
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.8e-29 132.9 133 59.4
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.3e-29 132.5 148 53.4
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.1e-29 132.1 146 54.8
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 5.2e-29 131.3 134 58.2
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 1.2e-28 130.2 133 55.6
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 1.5e-28 129.8 87 82.8
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.5e-28 129.8 147 52.4
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.6e-28 129.0 133 54.9
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 3.4e-28 128.6 133 54.1
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.3e-27 126.7 147 51.7
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.9e-26 122.9 134 58.2
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.9e-26 122.9 134 58.2
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.9e-26 122.9 133 56.4
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 1.9e-26 122.9 136 56.6
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 3.2e-26 122.1 131 58.0
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 7.1e-26 120.9 127 52.8
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 7.1e-26 120.9 140 53.6
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 7.1e-26 120.9 125 57.6
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 7.1e-26 120.9 145 53.1
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.6e-25 119.8 127 52.0
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.7e-24 116.3 139 55.4
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 3.9e-24 115.2 173 41.6
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 6.6e-24 114.4 128 53.9
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 8.6e-24 114.0 125 54.4
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 1.9e-23 112.8 130 55.4
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 1.9e-23 112.8 117 58.1
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 9.5e-23 110.5 131 55.7
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 2.8e-22 109.0 123 55.3
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.7e-22 108.2 138 47.1
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.7e-22 108.2 136 48.5
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 6.2e-22 107.8 68 79.4
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 8.1e-22 107.5 121 52.9
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 3.1e-21 105.5 121 54.5
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 5.2e-21 104.8 123 53.7
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 2.0e-20 102.8 131 50.4
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 4.4e-20 101.7 88 62.5
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.1e-18 97.1 124 48.4
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.4e-18 96.7 99 58.6
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.9e-18 96.3 133 48.9
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.9e-18 96.3 133 48.9
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 4.2e-18 95.1 92 57.6
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 4.2e-18 95.1 123 50.4
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 5.4e-18 94.7 121 53.7
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 7.1e-18 94.4 133 48.1
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.6e-17 93.2 129 50.4
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 2.7e-17 92.4 112 50.0
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 4.6e-17 91.7 125 45.6
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 4.6e-17 91.7 131 48.9
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.6e-17 91.7 123 51.2
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 6.0e-17 91.3 112 49.1
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.0e-16 90.5 86 59.3
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.3e-16 90.1 106 50.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 2.3e-16 89.4 118 52.5
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.9e-16 88.6 132 47.0
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 5.1e-16 88.2 131 48.9
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 6.6e-16 87.8 123 48.8
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.1e-15 87.0 121 47.9
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 2.5e-15 85.9 124 46.8
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 2.5e-15 85.9 119 46.2
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 3.3e-15 85.5 61 73.8
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 7.3e-15 84.3 73 63.0
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.6e-14 83.2 97 49.5
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 3.6e-14 82.0 64 71.9
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 4.8e-14 81.6 135 43.0
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 1.1e-13 80.5 125 45.6
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.1e-13 80.5 66 65.2
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 1.1e-13 80.5 102 47.1
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.4e-13 80.1 71 62.0
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.6e-12 75.9 59 69.5
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 6.4e-11 71.2 66 57.6
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 1.4e-10 70.1 88 56.8
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.1e-09 66.2 83 49.4
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 5.1e-08 61.6 46 67.4
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 1.1e-07 60.5 65 49.2
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 3.3e-07 58.9 67 47.8


User provided reference genes

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