Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.6e-200 701.4 366 100.0
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 2.6e-182 642.1 366 90.2
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 9.4e-177 623.6 366 88.8
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 2.1e-176 622.5 381 86.4
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 3.6e-176 621.7 368 87.5
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 1.4e-175 619.8 366 87.2
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 4.0e-175 618.2 366 86.9
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 5.2e-175 617.8 366 87.7
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.8e-172 609.4 367 86.1
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.7e-170 602.8 367 86.9
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 3.6e-168 595.1 396 79.8
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 8.0e-168 594.0 401 79.1
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 6.4e-157 557.8 365 79.5
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 3.3e-153 545.4 366 78.1
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 9.5e-153 543.9 366 77.3
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.6e-152 543.1 366 78.4
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 2.8e-152 542.3 376 77.7
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 5.8e-150 534.6 368 76.9
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 3.7e-149 531.9 366 76.5
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 8.3e-149 530.8 372 75.3
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 3.2e-148 528.9 364 75.5
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 7.3e-145 517.7 371 74.9
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 2.3e-143 512.7 366 74.3
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 7.6e-142 507.7 366 74.0
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 4.9e-141 505.0 365 73.4
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 1.9e-140 503.1 361 73.1
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 1.9e-140 503.1 376 72.3
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.7e-139 499.2 351 73.5
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.5e-139 498.8 368 72.3
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 2.8e-136 489.2 351 72.9
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 4.7e-136 488.4 370 71.4
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 3.1e-135 485.7 348 73.0
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.2e-134 483.8 348 73.0
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 7.9e-123 444.5 370 63.5
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.1e-121 440.7 370 62.7
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 2.5e-121 439.5 370 62.7
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 2.0e-118 429.9 368 63.0
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 4.5e-118 428.7 366 60.7
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 9.9e-118 427.6 366 60.7
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 9.9e-118 427.6 365 62.5
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 6.4e-117 424.9 371 60.9
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 6.4e-117 424.9 364 61.8
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 3.2e-116 422.5 378 60.6
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 3.2e-116 422.5 368 61.1
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 7.9e-115 417.9 371 59.6
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.3e-114 417.2 365 60.0
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.3e-114 417.2 370 60.0
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 2.3e-114 416.4 369 59.3
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 3.9e-114 415.6 371 58.5
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-113 413.3 364 59.6
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 6.2e-112 408.3 369 57.2
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 3.4e-110 402.5 371 57.1
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 2.9e-109 399.4 368 57.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 6.5e-109 398.3 293 72.7
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 8.4e-109 397.9 369 57.7
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 2.5e-108 396.4 369 58.3
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 7.1e-108 394.8 367 56.7
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 1.6e-107 393.7 370 57.8
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 6.0e-107 391.7 374 54.8
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 1.3e-106 390.6 368 56.0
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 1.3e-106 390.6 366 56.0
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.3e-106 390.6 368 54.1
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 1.8e-106 390.2 365 57.0
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.1e-105 387.5 371 56.1
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.1e-105 387.5 366 55.5
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 2.5e-105 386.3 366 54.4
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 3.3e-105 386.0 366 54.1
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 3.3e-105 386.0 366 55.5
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 4.3e-105 385.6 370 54.6
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 4.8e-104 382.1 369 53.9
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 8.2e-104 381.3 366 53.3
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 1.1e-103 380.9 367 55.0
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.1e-103 380.9 366 53.8
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.4e-103 380.6 368 54.6
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.4e-103 380.6 368 54.6
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 1.4e-103 380.6 365 53.7
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 1.4e-103 380.6 366 56.0
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.5e-102 377.1 366 53.3
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 2.0e-102 376.7 364 54.4
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 2.0e-102 376.7 366 55.7
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 2.6e-102 376.3 367 54.5
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 4.5e-102 375.6 366 52.7
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 7.6e-102 374.8 368 53.8
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.0e-101 374.4 365 55.9
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.3e-101 374.0 381 52.5
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 8.5e-101 371.3 368 54.3
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.4e-100 370.5 366 55.2
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 1.9e-100 370.2 365 55.1
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 4.2e-100 369.0 368 53.0
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 7.2e-100 368.2 369 55.3
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 1.2e-99 367.5 401 49.9
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 1.6e-99 367.1 372 53.5
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 4.6e-99 365.5 361 51.2
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 7.9e-99 364.8 369 52.8
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.9e-98 362.5 367 51.2
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 5.1e-98 362.1 363 52.3
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 6.7e-98 361.7 365 55.3
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 8.7e-98 361.3 371 50.9
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 1.3e-96 357.5 362 51.1
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 2.2e-96 356.7 364 53.0
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.2e-96 356.7 387 51.2
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 4.8e-96 355.5 370 52.4
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 2.4e-95 353.2 322 59.9
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 7.7e-94 348.2 364 50.5
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 1.0e-93 347.8 400 47.5
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 1.3e-93 347.4 370 48.6
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 5.5e-92 342.0 355 52.1
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 7.2e-92 341.7 330 53.3
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 7.2e-92 341.7 374 48.9
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 9.4e-92 341.3 310 57.7
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 1.4e-90 337.4 484 43.4
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 2.6e-89 333.2 368 49.2
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 5.7e-89 332.0 506 41.1
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.7e-88 329.3 315 56.5
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 5.3e-87 325.5 393 44.5
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 3.4e-86 322.8 366 50.8
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 1.0e-85 321.2 368 49.5
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 2.9e-85 319.7 294 57.5
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 6.5e-85 318.5 285 57.2
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 4.7e-83 312.4 318 53.5
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.0e-82 309.7 316 56.0
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 5.7e-81 305.4 361 44.0
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 5.7e-81 305.4 373 47.2
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 5.7e-81 305.4 371 44.5
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 3.7e-80 302.8 372 45.2
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 1.1e-79 301.2 364 47.5
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 7.0e-79 298.5 313 52.7
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 5.9e-78 295.4 561 37.3
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.1e-76 291.2 309 49.8
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.7e-67 260.0 209 66.0
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.4e-65 253.1 208 62.0
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 1.4e-63 247.7 472 32.6
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 5.4e-63 245.7 209 60.3
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.0e-61 241.5 228 53.5
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 6.5e-61 238.8 207 57.5
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.3e-58 230.3 178 67.4
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.6e-57 226.9 178 66.9
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 3.4e-57 226.5 383 36.6
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 4.4e-57 226.1 178 66.9
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 1.3e-56 224.6 338 39.6
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.3e-56 222.2 159 71.1
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 6.3e-56 222.2 317 39.7
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 1.4e-55 221.1 309 40.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.6e-54 217.6 300 44.3
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.5e-54 216.1 164 67.7
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.8e-54 215.3 204 55.4
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 7.8e-54 215.3 166 67.5
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.3e-53 213.8 204 54.9
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 3.8e-53 213.0 162 67.3
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 2.5e-52 210.3 202 55.9
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.6e-51 206.5 178 62.9
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.1e-47 193.0 374 34.8
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.6e-46 191.0 380 34.2
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 3.9e-45 186.4 285 43.2
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.5e-44 184.5 378 33.6
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.3e-44 183.3 380 32.1
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 7.3e-44 182.2 155 58.7
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.8e-42 175.6 190 56.8
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 1.3e-40 171.4 367 31.3
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 4.1e-39 166.4 256 39.5
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 6.6e-37 159.1 130 64.6
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 4.7e-35 152.9 200 40.0
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 4.0e-34 149.8 372 28.0
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.5e-33 147.9 164 48.2
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 1.7e-32 144.4 126 58.7
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-30 138.3 106 68.9
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.2e-30 138.3 156 46.2
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.0e-30 136.0 153 52.9
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 1.7e-29 134.4 156 44.9
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.7e-27 126.3 134 49.3
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 7.6e-25 119.0 172 41.9
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 2.2e-24 117.5 130 46.9
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 5.1e-21 106.3 137 44.5
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 6.6e-21 105.9 137 43.8
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 9.3e-15 85.5 254 27.6
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.9e-12 77.8 305 28.5
Cfa024504 Carpinus fangiana HOM05D002209 ORTHO05D004761 2.6e-09 67.4 262 26.7


User provided reference genes

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