Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.8e-180 634.4 326 100.0
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.3e-171 604.4 324 94.8
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 6.9e-171 604.0 322 95.7
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.2e-170 603.2 322 95.0
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 2.6e-170 602.1 322 95.3
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.0e-169 600.1 323 94.1
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.0e-169 600.1 323 94.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.9e-169 598.6 322 94.7
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.4e-168 596.3 323 93.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 7.1e-168 594.0 325 93.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.2e-167 593.2 329 92.4
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.5e-162 574.7 324 89.2
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 2.2e-148 529.3 322 82.6
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 6.1e-135 484.6 317 73.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.1e-135 484.6 319 74.6
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.7e-132 475.3 316 72.8
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.1e-131 473.8 317 74.1
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.8e-131 473.0 318 72.3
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 3.1e-131 472.2 324 71.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 7.0e-131 471.1 316 71.8
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 9.1e-131 470.7 316 72.8
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.7e-130 469.2 316 71.2
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.5e-130 468.8 319 70.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 3.5e-130 468.8 319 70.5
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 4.5e-130 468.4 320 70.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.7e-129 466.5 319 70.2
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.9e-129 465.7 316 73.1
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 6.5e-129 464.5 316 72.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 8.5e-129 464.2 315 72.1
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.1e-128 463.8 315 72.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.1e-128 463.8 316 72.2
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.1e-128 463.8 319 69.3
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.5e-128 463.4 316 72.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.2e-128 462.2 318 71.7
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 9.4e-128 460.7 316 72.5
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.6e-127 458.8 316 70.6
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 8.0e-127 457.6 316 70.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.3e-126 456.1 315 71.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 6.8e-126 454.5 318 68.9
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 6.8e-126 454.5 319 71.5
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.2e-125 453.8 317 70.3
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 2.2e-124 449.5 315 70.2
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 3.7e-124 448.7 316 68.0
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 4.8e-124 448.4 316 69.3
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 6.3e-124 448.0 303 73.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.8e-123 446.4 317 68.5
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 4.1e-123 445.3 316 69.6
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.6e-122 443.4 316 69.0
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 2.0e-122 443.0 315 68.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.5e-122 442.2 315 69.2
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 4.5e-122 441.8 316 66.8
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 7.7e-122 441.0 316 69.0
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.5e-120 436.0 316 67.4
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 9.5e-120 434.1 323 66.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.6e-119 433.3 302 70.5
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 3.6e-119 432.2 316 67.1
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 6.1e-119 431.4 315 66.3
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-118 430.6 305 67.9
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 3.0e-118 429.1 314 68.2
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.0e-118 428.7 305 67.5
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 5.7e-117 424.9 303 68.0
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-116 423.3 359 61.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 2.2e-116 422.9 312 67.0
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.2e-116 422.9 306 67.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 2.8e-116 422.5 337 63.5
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.7e-116 422.2 316 65.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 6.3e-116 421.4 316 67.7
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.4e-115 420.2 319 64.9
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.1e-115 418.7 296 69.6
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 5.4e-115 418.3 322 66.5
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.6e-114 416.8 316 64.9
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 2.9e-113 412.5 308 65.9
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.0e-113 411.8 270 74.8
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 3.3e-112 409.1 302 67.2
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.5e-112 407.5 318 65.7
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.7e-108 396.7 316 61.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-106 390.6 316 63.0
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 7.8e-106 387.9 269 71.7
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.7e-105 386.7 316 63.3
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.6e-105 384.4 305 63.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.3e-104 382.1 200 94.0
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 8.0e-103 377.9 297 63.3
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-100 369.8 337 58.2
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 6.0e-98 361.7 314 59.2
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 6.6e-97 358.2 255 70.6
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.1e-96 357.5 313 60.7
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 9.5e-96 354.4 270 67.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 9.5e-96 354.4 270 67.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 3.7e-92 342.4 246 66.3
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-88 330.9 232 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 7.3e-88 328.2 313 51.8
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.4e-85 318.9 320 50.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 4.6e-82 308.9 256 62.1
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.5e-80 303.9 316 51.3
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 8.1e-79 298.1 314 45.2
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.4e-78 296.6 314 45.9
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 4.0e-78 295.8 212 66.5
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 1.5e-72 277.3 216 64.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 9.6e-72 274.6 180 72.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 9.0e-70 268.1 307 44.6
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 5.8e-69 265.4 232 58.2
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 3.5e-66 256.1 268 50.0
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.8e-62 243.8 333 44.4
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.1e-57 225.7 315 40.6
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.3e-49 200.3 145 66.9
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 2.1e-42 177.2 127 64.6
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 3.3e-40 169.9 129 62.8
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.1e-38 163.3 228 40.4
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 6.3e-31 139.0 247 35.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 5.3e-30 136.0 103 65.0
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.8e-22 110.9 95 58.9
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 5.3e-22 109.4 179 38.0
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 7.0e-22 109.0 87 62.1
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 8.5e-20 102.1 69 75.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.0e-08 64.3 70 50.0
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 7.0e-06 55.8 44 54.5


User provided reference genes

Program Settings