Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 7.8e-56 220.3 118 100.0
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 8.9e-52 206.8 118 94.1
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 4.9e-50 201.1 118 89.8
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 1.4e-49 199.5 118 90.7
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 1.4e-49 199.5 118 90.7
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 1.4e-49 199.5 119 89.9
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 3.5e-48 194.9 119 86.6
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 7.8e-48 193.7 112 90.2
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 1.3e-47 193.0 118 89.8
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 1.3e-47 193.0 120 86.7
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 1.3e-47 193.0 118 89.8
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 8.6e-47 190.3 118 89.0
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 1.5e-46 189.5 118 88.1
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 1.9e-46 189.1 118 83.1
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 4.3e-46 188.0 119 87.4
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-43 178.7 119 82.4
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 2.6e-43 178.7 119 82.4
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.7e-42 176.0 119 82.4
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 9.9e-35 150.2 118 72.9
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 1.9e-30 136.0 107 73.8
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 1.1e-28 130.2 76 86.8
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 6.4e-26 120.9 118 55.1
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 4.2e-25 118.2 119 56.3
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.0e-23 113.6 121 49.6
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 2.3e-23 112.5 117 55.6
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 5.1e-23 111.3 118 53.4
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 1.5e-22 109.8 112 54.5
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 2.5e-22 109.0 117 52.1
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 3.3e-22 108.6 117 53.0
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 3.3e-22 108.6 116 50.9
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 3.3e-22 108.6 117 53.0
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 4.3e-22 108.2 104 58.7
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 5.6e-22 107.8 118 50.0
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 5.6e-22 107.8 100 58.0
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 9.6e-22 107.1 117 50.4
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 1.3e-21 106.7 117 55.6
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 1.3e-21 106.7 104 57.7
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 1.3e-21 106.7 118 51.7
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 2.8e-21 105.5 111 52.3
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 3.6e-21 105.1 117 54.7
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 4.8e-21 104.8 110 54.5
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 4.8e-21 104.8 118 48.3
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 4.8e-21 104.8 110 53.6
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 8.1e-21 104.0 106 55.7
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 8.1e-21 104.0 118 50.0
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 1.1e-20 103.6 119 51.3
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 3.1e-20 102.1 105 57.1
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 4.0e-20 101.7 120 49.2
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 5.3e-20 101.3 98 57.1
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 6.9e-20 100.9 76 75.0
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 6.9e-20 100.9 76 75.0
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 9.0e-20 100.5 112 55.4
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.2e-19 100.1 94 56.4
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 1.2e-19 100.1 116 50.9
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.2e-19 100.1 118 50.0
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.5e-19 99.8 118 50.0
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 2.0e-19 99.4 117 47.9
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 2.0e-19 99.4 118 50.0
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 2.0e-19 99.4 116 49.1
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 2.6e-19 99.0 117 48.7
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 119 51.3
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.6e-19 99.0 119 49.6
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 3.4e-19 98.6 119 45.4
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 3.4e-19 98.6 94 58.5
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 4.5e-19 98.2 117 48.7
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 4.5e-19 98.2 112 50.0
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 5.8e-19 97.8 118 48.3
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 5.8e-19 97.8 118 47.5
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 5.8e-19 97.8 117 50.4
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 7.6e-19 97.4 101 56.4
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 9.9e-19 97.1 111 49.5
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.3e-18 96.7 111 49.5
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.9e-18 95.5 119 45.4
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.9e-18 95.5 116 50.9
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 3.8e-18 95.1 85 58.8
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 4.9e-18 94.7 118 50.0
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 6.4e-18 94.4 119 47.1
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 8.4e-18 94.0 111 45.0
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 1.4e-17 93.2 107 46.7
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.9e-17 92.8 105 48.6
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 2.4e-17 92.4 118 43.2
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 7.1e-17 90.9 86 53.5
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.6e-16 89.7 116 46.6
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 2.7e-16 89.0 101 46.5
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 4.6e-16 88.2 85 50.6
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 7.9e-16 87.4 89 51.7
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 1.0e-15 87.0 95 48.4
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 1.0e-15 87.0 96 47.9
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 2.3e-15 85.9 118 44.1
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 3.9e-15 85.1 88 48.9
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 8.7e-15 84.0 106 46.2
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 2.5e-14 82.4 107 44.9
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 1.6e-13 79.7 121 43.8
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 3.7e-13 78.6 121 43.8
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 4.8e-13 78.2 114 41.2
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 9.0e-12 73.9 98 44.9
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 4.5e-11 71.6 116 39.7
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.8e-11 71.2 71 54.9
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.8e-11 71.2 79 50.6
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 9.9e-11 70.5 79 49.4
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 6.0e-08 61.2 111 35.1
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 1.8e-07 59.7 81 42.0
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.8e-07 59.7 60 55.0
C06p03570 Brassica napus HOM05D029218 ORTHO05D042858 3.9e-07 58.5 40 75.0
C06p03590 Brassica napus HOM05D029218 ORTHO05D009066 8.7e-07 57.4 41 75.6
C06p03640 Brassica napus HOM05D029218 ORTHO05D009066 8.7e-07 57.4 41 75.6
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 5.6e-06 54.7 81 42.0


User provided reference genes

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