Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g34780 Schrenkiella parvula HOM05D003814 ORTHO05D004399 1.2e-224 782.7 371 100.0
Sp1g34730 Schrenkiella parvula HOM05D003814 ORTHO05D004399 1.1e-164 583.6 338 82.8
A04p14880 Brassica napus HOM05D003814 ORTHO05D004399 3.6e-123 445.7 355 62.5
BraA04t17126Z Brassica rapa HOM05D003814 ORTHO05D004399 3.6e-123 445.7 355 62.5
SpUn1086_0010 Schrenkiella parvula HOM05D003814 ORTHO05D004399 7.0e-119 431.4 290 70.7
Thhalv10028265m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 3.7e-112 409.1 347 60.2
CARHR272950 Cardamine hirsuta HOM05D003814 ORTHO05D004399 6.8e-106 388.3 378 55.3
Sp1g34880 Schrenkiella parvula HOM05D003814 ORTHO05D004399 6.6e-101 371.7 343 58.3
Carub.0007s3375 Capsella rubella HOM05D003814 ORTHO05D004399 5.2e-98 362.1 344 55.5
Carub.0007s3374 Capsella rubella HOM05D003814 ORTHO05D004399 7.8e-86 321.6 326 53.4
Thhalv10028201m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 1.1e-82 311.2 326 54.0
C04p48950 Brassica napus HOM05D003814 ORTHO05D004399 8.9e-82 308.1 356 48.9
BolC4t26476H Brassica oleracea HOM05D003814 ORTHO05D004399 8.9e-82 308.1 356 48.9
A09p14840 Brassica napus HOM05D003814 ORTHO05D004399 1.4e-79 300.8 325 48.3
BraA09t37130Z Brassica rapa HOM05D003814 ORTHO05D004399 9.2e-79 298.1 332 48.5
BcaC04g22552 Brassica carinata HOM05D003814 ORTHO05D004399 2.7e-78 296.6 332 48.5
BolC9t54693H Brassica oleracea HOM05D003814 ORTHO05D004399 2.7e-78 296.6 332 48.5
BcaB07g31449 Brassica carinata HOM05D003814 ORTHO05D004399 3.5e-78 296.2 332 47.9
C09p17970 Brassica napus HOM05D003814 ORTHO05D004399 7.8e-78 295.0 329 48.3
Thhalv10029417m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 3.4e-73 279.6 337 48.4
AL2G10680 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 5.8e-73 278.9 353 44.8
BcaB06g27653 Brassica carinata HOM05D003814 ORTHO05D004399 2.7e-70 270.0 348 46.0
Aa31LG2G1300 Aethionema arabicum HOM05D003814 ORTHO05D004399 3.0e-69 266.5 314 45.2
CARHR290110 Cardamine hirsuta HOM05D003814 ORTHO05D004399 2.1e-67 260.4 319 44.2
AL2G10650 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 1.1e-66 258.1 372 40.9
AT1G64295 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 1.4e-66 257.7 350 42.3
Carub.0007s3376 Capsella rubella HOM05D003814 ORTHO05D004399 1.4e-66 257.7 347 42.4
Carub.0002s0052 Capsella rubella HOM05D003814 ORTHO05D004399 4.0e-66 256.1 351 42.2
Carub.0002s0053 Capsella rubella HOM05D003814 ORTHO05D004399 2.6e-65 253.4 360 44.2
BcaB07g31514 Brassica carinata HOM05D003814 ORTHO05D004399 4.4e-65 252.7 328 44.5
Sp7g03960 Schrenkiella parvula HOM05D003814 ORTHO05D004399 4.9e-64 249.2 348 41.7
AT1G64290 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 1.2e-62 244.6 336 42.3
CARHR050300 Cardamine hirsuta HOM05D003814 ORTHO05D004399 1.7e-61 240.7 323 43.0
Thhalv10023822m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 9.6e-60 235.0 328 41.8
A02p10510 Brassica napus HOM05D003814 ORTHO05D004399 2.8e-59 233.4 336 39.6
BcaC04g22634 Brassica carinata HOM05D003814 ORTHO05D004399 3.6e-59 233.0 317 42.3
BraA09t37073Z Brassica rapa HOM05D003814 ORTHO05D004399 4.8e-59 232.6 317 43.8
C02p17570 Brassica napus HOM05D003814 ORTHO05D004399 3.3e-52 209.9 318 38.7
Potri.008G038000 Populus trichocarpa HOM05D003814 ORTHO05D004399 6.9e-50 202.2 360 37.8
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 6.9e-50 202.2 307 38.1
AT5G41720 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 2.6e-49 200.3 183 57.9
Haze_08071 Corylus avellana HOM05D003814 ORTHO05D004399 4.5e-49 199.5 300 37.0
AL7G47620 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 7.6e-49 198.7 182 57.7
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 9.9e-49 198.4 337 35.0
CiPaw.01G298600 Carya illinoinensis HOM05D003814 ORTHO05D004399 2.4e-47 193.7 358 35.2
Potri.010G224400 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.2e-47 193.0 318 39.0
Ciclev10007128m.g Citrus clementina HOM05D003814 ORTHO05D004399 9.3e-47 191.8 303 37.6
Cfa001318 Carpinus fangiana HOM05D003814 ORTHO05D004399 3.3e-44 183.3 335 36.7
RcHm_v2.0_Chr2g0094241 Rosa chinensis HOM05D003814 ORTHO05D004399 6.2e-43 179.1 298 36.2
Thecc.09G080800 Theobroma cacao HOM05D003814 ORTHO05D004399 1.5e-41 174.5 301 33.6
Duzib168G0557 Durio zibethinus HOM05D003814 ORTHO05D004399 2.0e-41 174.1 337 32.3
Potri.007G037500 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.0e-40 171.8 345 32.2
Duzib187G0024 Durio zibethinus HOM05D003814 ORTHO05D004399 1.7e-40 171.0 318 32.7
QL05p073999 Quercus lobata HOM05D003814 ORTHO05D004399 8.4e-40 168.7 279 38.0
Nitab4.5_0000073g0260 Nicotiana tabacum HOM05D003814 ORTHO05D004399 1.9e-39 167.5 335 32.5
Potri.008G214000 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.9e-39 167.5 345 30.7
Cc08_g07160 Coffea canephora HOM05D003814 ORTHO05D004399 5.5e-39 166.0 333 31.2
Dinv25578 Davidia involucrata HOM05D003814 ORTHO05D004399 1.2e-38 164.9 330 32.7
FvH4_1g08170 Fragaria vesca HOM05D003814 ORTHO05D004399 2.1e-38 164.1 328 33.8
FAN19G0873 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.1e-38 164.1 328 33.8
Potri.014G187100 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.1e-38 164.1 349 31.8
Potri.017G066400 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.1e-38 164.1 345 31.3
QL03p008482 Quercus lobata HOM05D003814 ORTHO05D004399 3.5e-38 163.3 269 36.1
MD15G1214200 Malus domestica HOM05D003814 ORTHO05D004399 6.0e-38 162.5 341 32.0
Haze_11116 Corylus avellana HOM05D003054 ORTHO05D003376 3.0e-37 160.2 297 32.3
PGR004G0767 Punica granatum HOM05D003814 ORTHO05D004399 5.1e-37 159.5 281 35.2
TAR178G0001 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.1e-36 158.3 323 32.8
FAN26G3410 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.5e-36 157.1 328 33.5
Sabra16G0039400 Salix brachista HOM05D003814 ORTHO05D004399 4.3e-36 156.4 252 37.3
TAR624G1373 Trochodendron aralioides HOM05D003814 ORTHO05D004399 4.3e-36 156.4 323 32.5
FAN23G2856 Fragaria x ananassa HOM05D003814 ORTHO05D004399 5.7e-36 156.0 313 33.5
FAN26G2103 Fragaria x ananassa HOM05D003814 ORTHO05D004399 7.4e-36 155.6 328 33.2
Sabra10G0173600 Salix brachista HOM05D001546 ORTHO05D004399 1.3e-35 154.8 281 34.5
DCAR_028786 Daucus carota HOM05D003814 ORTHO05D004399 2.1e-35 154.1 307 32.2
Manes.04G143500 Manihot esculenta HOM05D003814 ORTHO05D004399 2.8e-35 153.7 291 33.3
Potri.001G462650 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.8e-35 153.7 263 35.0
Hma1.2p1_0169F.1_g074710 Hydrangea macrophylla HOM05D003814 ORTHO05D004399 8.2e-35 152.1 296 33.4
TAR636G0432 Trochodendron aralioides HOM05D003814 ORTHO05D004399 2.4e-34 150.6 324 30.2
FAN26G3081 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.2e-33 148.3 210 42.9
A09p14250 Brassica napus HOM05D002195 ORTHO05D002898 1.5e-33 147.9 201 43.3
Peaxi162Scf00928g00024 Petunia axillaris HOM05D003814 ORTHO05D004399 3.4e-33 146.7 338 30.8
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 7.6e-33 145.6 286 32.2
FAN28G0169 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.7e-32 144.4 266 35.7
COL.COLO4_18129 Corchorus olitorius HOM05D003814 ORTHO05D004399 5.0e-32 142.9 359 31.5
FvH4_1g08161 Fragaria vesca HOM05D003814 ORTHO05D004399 5.0e-32 142.9 188 42.6
FAN28G0704 Fragaria x ananassa HOM05D003814 ORTHO05D004399 5.0e-32 142.9 214 40.7
Potri.006G167500 Populus trichocarpa HOM05D003814 ORTHO05D004399 5.0e-32 142.9 284 33.8
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 8.5e-32 142.1 264 33.3
AT2G05360 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 2.5e-31 140.6 313 32.9
C09p17160 Brassica napus HOM05D002195 ORTHO05D002898 3.2e-31 140.2 315 31.4
BolC9t54614H Brassica oleracea HOM05D002195 ORTHO05D002898 3.2e-31 140.2 315 31.4
Thecc.06G118300 Theobroma cacao HOM05D003814 ORTHO05D004399 3.2e-31 140.2 294 31.3
Prupe.7G202800 Prunus persica HOM05D003814 ORTHO05D004399 7.2e-31 139.0 271 33.6
HanXRQChr04g0107941 Helianthus annuus HOM05D003814 ORTHO05D004399 1.2e-30 138.3 278 32.4
Gohir.D04G023700 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.6e-30 137.9 320 30.0
Gohir.D04G029200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.6e-30 137.9 321 30.2
HanXRQChr04g0126191 Helianthus annuus HOM05D003814 ORTHO05D004399 3.6e-30 136.7 275 31.3
SHI03045 Sapria himalayana HOM05D003814 ORTHO05D004399 7.9e-30 135.6 289 33.6
SHI03051 Sapria himalayana HOM05D003814 ORTHO05D004399 7.9e-30 135.6 289 33.6
MELO3C009576.2 Cucumis melo HOM05D003814 ORTHO05D004399 1.8e-29 134.4 306 30.7
Gorai.012G033100 Gossypium raimondii HOM05D003814 ORTHO05D004399 2.3e-29 134.0 318 29.9
Lsat_1_v5_gn_8_86340 Lactuca sativa HOM05D003814 ORTHO05D004399 5.1e-29 132.9 299 30.1
Gohir.A02G162300 Gossypium hirsutum HOM05D003814 ORTHO05D004399 6.7e-29 132.5 345 28.4
Gohir.D04G024036 Gossypium hirsutum HOM05D003814 ORTHO05D004399 2.5e-28 130.6 321 29.6
Gohir.A05G386550 Gossypium hirsutum HOM05D003814 ORTHO05D004399 4.3e-28 129.8 334 30.8
Prupe.7G202900 Prunus persica HOM05D003814 ORTHO05D004399 4.3e-28 129.8 279 31.9
HanXRQChr11g0341161 Helianthus annuus HOM05D003814 ORTHO05D004399 1.3e-27 128.3 345 28.1
PGSC0003DMG400037022 Solanum tuberosum HOM05D003814 ORTHO05D004399 2.8e-27 127.1 228 33.3
MD02G1086300 Malus domestica HOM05D003814 ORTHO05D004399 6.3e-27 125.9 295 30.8
Lsat_1_v5_gn_6_92600 Lactuca sativa HOM05D003814 ORTHO05D004399 8.2e-27 125.6 288 30.9
Lsat_1_v5_gn_1_71940 Lactuca sativa HOM05D003814 ORTHO05D004399 1.1e-26 125.2 352 28.1
CAN.G625.43 Capsicum annuum HOM05D003814 ORTHO05D004399 1.4e-26 124.8 303 32.3
Nitab4.5_0000343g0080 Nicotiana tabacum HOM05D003814 ORTHO05D004399 3.1e-26 123.6 272 30.5
FAN23G1165 Fragaria x ananassa HOM05D003814 ORTHO05D004399 4.1e-26 123.2 186 40.9
Gorai.003G018500 Gossypium raimondii HOM05D003814 ORTHO05D004399 4.1e-26 123.2 340 28.8
Gohir.D03G018133 Gossypium hirsutum HOM05D003814 ORTHO05D004399 5.3e-26 122.9 341 29.3
TAR624G1176 Trochodendron aralioides HOM05D003814 ORTHO05D004399 9.1e-26 122.1 241 30.7
Gohir.A07G014200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.5e-25 121.3 321 29.0
Gohir.D07G013832 Gossypium hirsutum HOM05D003814 ORTHO05D004399 3.4e-25 120.2 312 31.4
Aqoxy5G02065 Aquilegia oxysepala HOM05D003814 ORTHO05D004399 5.9e-25 119.4 332 29.2
Haze_11119 Corylus avellana HOM05D003814 ORTHO05D004399 5.9e-25 119.4 184 38.0
Zm00001eb202740 Zea mays HOM05D003814 ORTHO05D004399 5.9e-25 119.4 248 31.9
ClCG10G017950 Citrullus lanatus HOM05D003814 ORTHO05D004399 7.7e-25 119.0 276 30.1
Sed0024854 Sechium edule HOM05D003814 ORTHO05D004399 1.0e-24 118.6 296 29.1
Gohir.A07G014250 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.3e-24 118.2 321 29.0
PGR004G1882 Punica granatum HOM05D003814 ORTHO05D004399 3.8e-24 116.7 266 33.1
ECA246G3486 Erigeron canadensis HOM05D003814 ORTHO05D004399 5.0e-24 116.3 281 29.5
Gorai.001G014600 Gossypium raimondii HOM05D003814 ORTHO05D004399 5.0e-24 116.3 312 31.1
PSO170G6690 Papaver somniferum HOM05D003814 ORTHO05D004399 5.0e-24 116.3 298 31.5
PSO478G3480 Papaver somniferum HOM05D003814 ORTHO05D004399 5.0e-24 116.3 216 37.5
Migut.E01439 Erythranthe guttata HOM05D003814 ORTHO05D004399 6.5e-24 115.9 336 25.9
FAN26G2210 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.4e-23 114.8 131 47.3
Peaxi162Scf00047g10141 Petunia axillaris HOM05D003814 ORTHO05D004399 1.4e-23 114.8 236 32.2
ClCG10G017770 Citrullus lanatus HOM05D003814 ORTHO05D004399 4.2e-23 113.2 295 29.5
PSO832G2394 Papaver somniferum HOM05D003814 ORTHO05D004399 4.2e-23 113.2 299 27.8
unitig_22.g5424 Utricularia gibba HOM05D003814 ORTHO05D004399 4.2e-23 113.2 300 31.3
PSO832G3562 Papaver somniferum HOM05D003814 ORTHO05D004399 5.5e-23 112.8 240 32.9
HanXRQChr04g0126041 Helianthus annuus HOM05D003814 ORTHO05D004399 1.2e-22 111.7 292 28.1
ECA236G4104 Erigeron canadensis HOM05D003814 ORTHO05D004399 1.6e-22 111.3 275 30.2
PGSC0003DMG400041501 Solanum tuberosum HOM05D003814 ORTHO05D004399 1.6e-22 111.3 331 27.8
PSO782G3287 Papaver somniferum HOM05D003814 ORTHO05D004399 2.1e-22 110.9 229 35.8
Peaxi162Scf00067g00233 Petunia axillaris HOM05D003814 ORTHO05D004399 7.9e-22 109.0 214 32.7
PGSC0003DMG400046351 Solanum tuberosum HOM05D003814 ORTHO05D004399 7.9e-22 109.0 278 28.1
unitig_22.g5418 Utricularia gibba HOM05D003814 ORTHO05D004399 3.0e-21 107.1 300 30.7
CsaV3_3G038340 Cucumis sativus L. HOM05D003814 ORTHO05D004399 5.1e-21 106.3 318 28.0
PSO170G5919 Papaver somniferum HOM05D003814 ORTHO05D004399 6.7e-21 105.9 247 28.7
CiPaw.04G145600 Carya illinoinensis HOM05D003814 ORTHO05D004399 1.1e-20 105.1 153 41.2
PGSC0003DMG400035508 Solanum tuberosum HOM05D003814 ORTHO05D004399 1.1e-20 105.1 140 40.0
PSO017G6459 Papaver somniferum HOM05D003814 ORTHO05D004399 3.3e-20 103.6 291 27.8
FAN19G3124 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.3e-19 101.7 149 40.3
PSO478G4598 Papaver somniferum HOM05D003814 ORTHO05D004399 2.2e-19 100.9 291 27.5
Haze_27585 Corylus avellana HOM05D003814 ORTHO05D004399 8.2e-19 99.0 193 31.1
PSO210G1123 Papaver somniferum HOM05D003814 ORTHO05D004399 8.2e-19 99.0 241 28.6
HanXRQChr04g0110661 Helianthus annuus HOM05D003814 ORTHO05D004399 2.4e-18 97.4 226 28.8
PSO782G0050 Papaver somniferum HOM05D003814 ORTHO05D004399 2.4e-18 97.4 212 35.4
TAR636G1188 Trochodendron aralioides HOM05D003814 ORTHO05D004399 5.9e-17 92.8 214 30.4
ATR0693G387 Amborella trichopoda HOM05D007162 ORTHO05D007631 2.9e-16 90.5 324 25.3
Migut.E01447 Erythranthe guttata HOM05D003814 ORTHO05D004399 1.9e-15 87.8 165 32.1
ECA236G4439 Erigeron canadensis HOM05D003814 ORTHO05D004399 7.9e-14 82.4 234 26.5
MD15G1214100 Malus domestica HOM05D003814 ORTHO05D004399 5.2e-13 79.7 177 29.9
Lsat_1_v5_gn_8_99821 Lactuca sativa HOM05D002339 ORTHO05D004399 2.6e-12 77.4 258 23.3
Gorai.003G018600 Gossypium raimondii HOM05D003814 ORTHO05D004399 9.7e-12 75.5 315 25.4
Lsat_1_v5_gn_8_83741 Lactuca sativa HOM05D003814 ORTHO05D004399 1.3e-11 75.1 255 23.9
SalBow1G2869 Salvia bowleyana HOM05D001856 ORTHO05D001959 1.3e-11 75.1 168 33.9
Peaxi162Scf00928g00006 Petunia axillaris HOM05D003814 ORTHO05D004399 3.7e-11 73.6 166 31.3
Lsat_1_v5_gn_2_42360 Lactuca sativa HOM05D003814 ORTHO05D004399 6.3e-11 72.8 172 26.2
PSO801G0304 Papaver somniferum HOM05D003814 ORTHO05D004399 1.1e-10 72.0 184 30.4
Cc06_g09830 Coffea canephora HOM05D000007 ORTHO05D000017 2.0e-09 67.8 302 21.2
Lsat_1_v5_gn_7_15380 Lactuca sativa HOM05D003814 ORTHO05D004399 5.9e-09 66.2 168 28.0
Lsat_1_v5_gn_5_64781 Lactuca sativa HOM05D003814 ORTHO05D004399 6.5e-08 62.8 145 26.2
ECA236G1426 Erigeron canadensis HOM05D000214 ORTHO05D000131 1.1e-07 62.0 46 54.3
Peaxi162Scf00928g00029 Petunia axillaris HOM05D003814 ORTHO05D004399 1.1e-07 62.0 118 31.4
TAR624G0077 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.9e-07 61.2 181 23.2
Rhsim01G0013500 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.5e-07 60.8 317 23.3
A03p28520 Brassica napus HOM05D000171 ORTHO05D000101 5.5e-07 59.7 283 22.6
BraA03t12054Z Brassica rapa HOM05D000171 ORTHO05D000101 7.2e-07 59.3 283 22.3
unitig_899.g14987 Utricularia gibba HOM05D002420 ORTHO05D002422 7.2e-07 59.3 266 21.1
ECA232G2420 Erigeron canadensis HOM05D000664 ORTHO05D000491 1.2e-06 58.5 235 26.0
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.2e-06 58.5 249 24.9
Thecc.01G037600 Theobroma cacao HOM05D002420 ORTHO05D002422 1.6e-06 58.2 276 22.5


User provided reference genes

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