Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-111 406.4 194 100.0
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-111 406.4 194 100.0
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.5e-96 356.3 199 85.4
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 9.0e-94 347.1 194 85.1
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.6e-93 345.5 194 85.1
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.0e-89 333.6 199 80.9
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.4e-89 333.2 195 83.1
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 5.1e-89 331.3 194 81.4
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.3e-84 316.6 194 79.4
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.3e-84 316.6 195 77.4
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.4e-83 313.2 195 78.5
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 7.9e-82 307.4 196 76.5
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.0e-69 266.2 207 68.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 5.7e-56 221.5 198 58.6
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.7e-37 159.5 199 44.7
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 7.8e-37 157.9 199 44.2
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.0e-36 157.5 199 44.2
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.9e-35 153.3 192 45.8
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 3.3e-35 152.5 192 46.9
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 3.3e-35 152.5 192 46.9
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 9.5e-35 151.0 201 41.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.1e-34 149.8 197 41.6
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 4.7e-34 148.7 161 47.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 1.4e-33 147.1 197 42.6
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.8e-33 146.7 199 41.7
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 2.0e-32 143.3 203 41.4
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.6e-32 142.9 196 42.9
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.3e-31 140.6 195 43.1
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.4e-30 136.3 199 43.7
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 4.1e-30 135.6 197 42.6
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 5.4e-30 135.2 193 38.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.2e-30 134.4 190 42.1
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 2.1e-29 133.3 197 41.6
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.7e-29 132.9 186 40.3
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 3.5e-29 132.5 203 40.4
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.5e-29 132.5 186 40.3
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.5e-29 132.5 185 40.0
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.0e-29 131.7 186 39.8
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 7.8e-29 131.3 203 38.9
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 1.0e-28 131.0 203 39.9
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.0e-28 131.0 184 43.5
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 3.9e-28 129.0 200 42.0
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.9e-28 129.0 199 39.7
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 5.1e-28 128.6 195 38.5
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 2.5e-27 126.3 190 40.5
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 4.3e-27 125.6 199 41.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 4.3e-27 125.6 199 38.2
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 7.3e-27 124.8 200 40.5
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.6e-26 123.6 190 35.8
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.6e-26 123.6 190 39.5
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 4.7e-26 122.1 188 38.8
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 8.1e-26 121.3 190 39.5
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 8.1e-26 121.3 187 41.2
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 1.4e-25 120.6 190 39.5
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 2.3e-25 119.8 190 34.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 2.3e-25 119.8 201 36.8
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 6.8e-25 118.2 204 36.8
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 6.8e-25 118.2 188 38.3
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.2e-24 117.5 198 34.8
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.5e-24 117.1 193 37.8
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.0e-24 116.7 203 34.5
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.0e-24 116.7 204 36.3
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.4e-24 115.9 202 39.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.4e-24 115.5 196 37.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 4.4e-24 115.5 192 38.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 7.6e-24 114.8 199 39.2
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 9.9e-24 114.4 199 38.7
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 9.9e-24 114.4 199 38.7
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.3e-23 114.0 198 36.4
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 1.7e-23 113.6 181 37.6
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-23 112.8 195 39.0
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 4.9e-23 112.1 200 36.0
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 8.4e-23 111.3 189 38.1
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.1e-22 110.9 113 49.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.9e-22 110.2 189 36.5
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 4.1e-22 109.0 179 38.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.2e-21 107.5 194 38.1
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.1e-21 106.7 186 36.0
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 2.7e-21 106.3 111 52.3
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.3e-20 104.0 190 31.6
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.7e-20 103.6 193 34.2
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 3.0e-20 102.8 181 34.3
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 5.1e-20 102.1 186 36.0
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 5.1e-20 102.1 194 34.0
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 8.6e-20 101.3 174 37.4
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 8.6e-20 101.3 157 41.4
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.1e-19 100.9 184 38.0
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 3.3e-19 99.4 190 33.7
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 9.6e-19 97.8 189 36.5
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.2e-18 97.4 197 35.0
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.2e-18 97.4 189 38.1
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.6e-18 97.1 195 33.8
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.8e-18 96.3 191 34.6
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 4.7e-18 95.5 195 33.8
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 4.7e-18 95.5 192 33.3
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 6.2e-18 95.1 162 39.5
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.4e-17 94.0 194 33.0
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.4e-17 94.0 205 32.2
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 2.4e-17 93.2 200 35.0
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.4e-17 93.2 159 36.5
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 3.1e-17 92.8 197 36.5
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 4.0e-17 92.4 189 32.3
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 4.0e-17 92.4 180 35.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 4.0e-17 92.4 192 32.8
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 6.9e-17 91.7 156 37.2
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 1.5e-16 90.5 69 69.6
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.5e-16 90.5 177 32.8
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 3.4e-16 89.4 69 68.1
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 5.8e-16 88.6 189 33.3
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.7e-15 87.0 196 33.2
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.5e-13 79.3 178 30.9
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.5e-13 79.3 178 30.9
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.3e-12 76.6 95 45.3
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 2.3e-12 76.6 161 34.8
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 5.3e-09 65.5 165 33.3
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 5.3e-09 65.5 148 29.1
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 6.9e-09 65.1 77 37.7
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 5.8e-08 62.0 77 37.7
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.9e-07 59.7 186 27.4
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 3.8e-07 59.3 34 70.6
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 6.4e-07 58.5 141 33.3
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 5.4e-06 55.5 34 67.6


User provided reference genes

Program Settings