Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g34170 Schrenkiella parvula HOM05D000300 ORTHO05D012934 7.3e-147 523.9 263 100.0
AL3G40150 Arabidopsis lyrata HOM05D000300 ORTHO05D013472 5.6e-30 135.6 184 46.2
BcaB04g18636 Brassica carinata HOM05D000300 ORTHO05D013472 1.2e-29 134.4 170 48.2
BolC3t16746H Brassica oleracea HOM05D000300 ORTHO05D013472 6.2e-29 132.1 169 47.9
BraA03t12864Z Brassica rapa HOM05D000300 ORTHO05D013472 6.2e-29 132.1 169 47.9
A03p37020 Brassica napus HOM05D000300 ORTHO05D013472 8.1e-29 131.7 169 47.9
BcaC01g04126 Brassica carinata HOM05D000300 ORTHO05D013472 1.8e-28 130.6 169 47.3
C03p44860 Brassica napus HOM05D000300 ORTHO05D013472 1.8e-28 130.6 169 47.3
Carub.0003s1068 Capsella rubella HOM05D000300 ORTHO05D013472 9.3e-25 118.2 189 42.3
CARHR100860 Cardamine hirsuta HOM05D000300 ORTHO05D013472 2.1e-24 117.1 182 45.6
BcaC01g04127 Brassica carinata HOM05D000300 ORTHO05D013472 4.3e-22 109.4 163 42.3
C03p44850 Brassica napus HOM05D000300 ORTHO05D013472 4.3e-22 109.4 163 42.3
BraA09t39325Z Brassica rapa HOM05D000300 ORTHO05D017381 4.6e-16 89.4 191 34.6
BcaC05g26797 Brassica carinata HOM05D000300 ORTHO05D017381 1.3e-15 87.8 162 34.6
BraA09t39326Z Brassica rapa HOM05D000300 ORTHO05D017381 6.7e-15 85.5 173 33.5
BcaB04g18635 Brassica carinata HOM05D036197 ORTHO05D032188 1.1e-14 84.7 152 38.2
AL7G37910 Arabidopsis lyrata HOM05D000300 ORTHO05D012934 2.1e-13 80.5 170 37.6
Thhalv10009907m.g Eutrema salsugineum HOM05D000300 ORTHO05D017381 4.8e-13 79.3 154 33.8
AT3G11350 Arabidopsis thaliana HOM05D000300 ORTHO05D013472 1.1e-12 78.2 82 53.7
BcaC05g26617 Brassica carinata HOM05D000300 ORTHO05D017381 6.9e-12 75.5 86 46.5
C05p26670 Brassica napus HOM05D000300 ORTHO05D017381 6.9e-12 75.5 86 46.5
C09p27650 Brassica napus HOM05D000300 ORTHO05D012934 9.0e-12 75.1 163 33.1
CARHR027470 Cardamine hirsuta HOM05D000300 ORTHO05D012934 4.5e-11 72.8 179 29.6
AL3G22860 Arabidopsis lyrata HOM05D000300 ORTHO05D013472 4.9e-10 69.3 134 34.3
BcaC04g21785 Brassica carinata HOM05D000300 ORTHO05D012934 8.4e-10 68.6 163 31.9
BolC9t55628H Brassica oleracea HOM05D000300 ORTHO05D012934 8.4e-10 68.6 163 31.9
AT3G11380 Arabidopsis thaliana HOM05D000300 ORTHO05D013472 1.1e-09 68.2 211 29.4
BcaC05g26618 Brassica carinata HOM05D000300 ORTHO05D012934 3.2e-09 66.6 121 35.5
AT1G28020 Arabidopsis thaliana HOM05D000300 ORTHO05D017381 5.5e-09 65.9 225 24.9
CARHR027480 Cardamine hirsuta HOM05D000300 ORTHO05D000383 2.1e-08 63.9 180 28.9
A01p09220 Brassica napus HOM05D000300 ORTHO05D000383 2.7e-08 63.5 155 29.0
BraA01t00865Z Brassica rapa HOM05D000300 ORTHO05D000383 2.7e-08 63.5 155 29.0
C01p10800 Brassica napus HOM05D000300 ORTHO05D000383 3.5e-08 63.2 155 29.0
Thhalv10027393m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 4.6e-08 62.8 159 30.2
BolC5t31390H Brassica oleracea HOM05D000300 ORTHO05D017381 1.0e-07 61.6 67 47.8
BolC1t01041H Brassica oleracea HOM05D000300 ORTHO05D000383 5.1e-07 59.3 155 29.7
Thhalv10001972m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 1.5e-06 57.8 269 23.4
BcaB04g18633 Brassica carinata HOM05D000300 ORTHO05D021402 7.4e-06 55.5 146 32.9
C05p26690 Brassica napus HOM05D000300 ORTHO05D012934 9.6e-06 55.1 117 35.0


User provided reference genes

Program Settings