Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.7e-126 456.1 232 100.0
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 3.0e-120 435.3 232 93.1
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 6.7e-120 434.1 232 93.5
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 6.7e-120 434.1 233 93.6
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 6.7e-120 434.1 233 93.6
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 2.0e-119 432.6 233 93.1
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 2.0e-119 432.6 233 93.1
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 2.0e-119 432.6 233 93.1
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 1.5e-114 416.4 232 88.8
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 7.2e-114 414.1 232 88.8
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 4.7e-113 411.4 230 88.7
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 3.7e-94 348.6 232 75.0
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 3.7e-94 348.6 195 87.2
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 1.4e-93 346.7 232 75.0
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 7.0e-93 344.4 232 74.1
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 9.2e-93 344.0 232 74.6
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 4.5e-92 341.7 232 74.6
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 1.0e-91 340.5 230 74.3
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 6.6e-91 337.8 230 73.9
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 6.6e-91 337.8 230 73.9
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 6.6e-91 337.8 232 72.0
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 5.6e-90 334.7 230 73.0
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 5.6e-90 334.7 230 73.0
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 1.6e-89 333.2 230 73.5
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 9.8e-87 323.9 232 72.0
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 6.4e-86 321.2 223 72.2
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 5.4e-85 318.2 223 71.3
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 2.7e-84 315.8 222 67.6
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 2.9e-78 295.8 216 65.7
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 6.4e-78 294.7 228 66.7
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 6.4e-78 294.7 228 66.7
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 1.1e-77 293.9 216 63.4
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 1.4e-77 293.5 217 63.6
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 4.1e-77 292.0 215 62.3
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 5.4e-77 291.6 216 63.4
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 7.0e-77 291.2 222 60.4
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 9.2e-77 290.8 224 60.7
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 9.2e-77 290.8 223 63.2
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.2e-76 290.4 217 64.5
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 1.6e-76 290.0 226 60.6
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 1.6e-76 290.0 223 61.9
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 6.0e-76 288.1 216 61.6
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 1.0e-75 287.3 216 63.4
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 1.3e-75 287.0 223 59.6
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 1.7e-75 286.6 216 63.9
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 1.7e-75 286.6 220 60.0
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 3.0e-75 285.8 228 59.2
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 8.6e-75 284.3 215 62.8
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 1.1e-74 283.9 216 61.6
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 1.9e-74 283.1 229 59.4
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 1.9e-74 283.1 216 61.1
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 3.3e-74 282.3 221 60.6
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 3.3e-74 282.3 217 63.1
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 3.3e-74 282.3 217 63.1
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 4.3e-74 282.0 226 60.6
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 5.6e-74 281.6 222 60.4
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 5.6e-74 281.6 216 61.1
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 7.3e-74 281.2 215 61.9
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 7.3e-74 281.2 216 62.0
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 9.5e-74 280.8 213 63.4
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 9.5e-74 280.8 224 59.8
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 9.5e-74 280.8 220 60.0
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.6e-73 280.0 227 59.5
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 3.6e-73 278.9 223 61.0
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 3.6e-73 278.9 216 60.6
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 6.2e-73 278.1 217 61.3
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.2e-73 278.1 227 59.0
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.2e-73 278.1 227 59.0
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 1.1e-72 277.3 230 58.7
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 1.1e-72 277.3 213 62.9
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 1.1e-72 277.3 223 58.3
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 1.1e-72 277.3 216 60.2
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 1.1e-72 277.3 226 60.2
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 1.4e-72 276.9 217 60.8
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 1.4e-72 276.9 216 60.6
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 1.8e-72 276.6 223 59.2
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 3.1e-72 275.8 227 58.6
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 4.0e-72 275.4 219 59.8
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 5.2e-72 275.0 222 59.9
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 4.4e-71 271.9 216 59.3
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 7.5e-71 271.2 213 60.1
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 7.5e-71 271.2 218 59.6
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 9.9e-71 270.8 219 58.0
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 1.3e-70 270.4 222 58.6
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 1.3e-70 270.4 226 59.3
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 1.3e-70 270.4 215 60.0
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 2.2e-70 269.6 222 58.6
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 2.2e-70 269.6 218 61.5
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 2.9e-70 269.2 214 61.2
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 2.9e-70 269.2 226 59.3
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 3.7e-70 268.9 222 58.1
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 8.3e-70 267.7 223 54.7
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 8.3e-70 267.7 226 58.4
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 1.4e-69 266.9 219 55.3
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.4e-69 266.2 222 58.6
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 4.1e-69 265.4 227 53.7
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 4.1e-69 265.4 219 57.1
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 5.4e-69 265.0 216 59.3
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 1.2e-68 263.8 249 53.4
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 1.6e-68 263.5 221 57.0
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 2.1e-68 263.1 229 56.8
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.5e-68 262.3 225 56.9
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 6.0e-68 261.5 218 57.3
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 5.1e-67 258.5 225 56.9
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 6.6e-67 258.1 220 56.8
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 5.6e-66 255.0 217 61.3
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.2e-65 253.8 221 51.6
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 3.6e-65 252.3 195 63.1
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 1.1e-64 250.8 188 63.3
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 1.4e-64 250.4 193 58.5
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 3.1e-64 249.2 196 60.7
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 3.1e-64 249.2 246 52.8
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 2.0e-63 246.5 216 54.6
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.0e-63 246.5 211 58.8
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.0e-63 246.5 211 58.8
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 4.4e-63 245.4 180 69.4
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 7.6e-63 244.6 217 58.1
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 7.6e-63 244.6 198 58.1
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 9.9e-63 244.2 272 49.6
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 8.4e-62 241.1 222 54.5
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 5.4e-61 238.4 184 60.3
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 9.2e-61 237.7 222 53.6
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 2.1e-60 236.5 215 52.1
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 2.7e-60 236.1 245 50.6
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 7.8e-60 234.6 215 53.5
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 9.6e-58 227.6 204 52.5
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.2e-57 227.3 191 53.4
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 2.4e-56 223.0 195 55.4
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 5.2e-56 221.9 219 50.2
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 7.1e-53 211.5 161 60.9
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 1.9e-50 203.4 157 59.9
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 3.6e-49 199.1 207 48.3
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 8.1e-49 198.0 152 59.9
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 8.1e-49 198.0 219 46.1
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 2.9e-46 189.5 169 57.4
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 3.8e-46 189.1 150 59.3
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 2.1e-44 183.3 168 51.8
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 6.0e-44 181.8 217 44.2
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 1.0e-43 181.0 239 43.5
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 3.0e-43 179.5 220 41.8
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 5.6e-42 175.3 218 43.1
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 1.6e-41 173.7 215 43.3
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.2e-38 163.3 220 44.1
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 5.1e-35 152.1 119 62.2
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 1.5e-34 150.6 121 58.7
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 1.3e-33 147.5 116 56.9
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 6.9e-32 141.7 193 39.9
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 7.4e-26 121.7 89 62.9
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 6.3e-25 118.6 124 48.4
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 8.2e-25 118.2 148 39.2
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 1.8e-24 117.1 89 60.7
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 3.1e-24 116.3 195 35.9
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 3.3e-18 96.3 69 73.9
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 2.0e-15 87.0 66 65.2
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.0e-15 87.0 153 35.9
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.0e-15 87.0 153 35.9
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 5.5e-13 79.0 62 62.9
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 7.2e-13 78.6 70 50.0
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.8e-09 65.9 76 46.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.1e-08 62.8 47 55.3


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