Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 4.9e-135 484.6 264 100.0
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 2.9e-127 458.8 264 90.5
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 1.9e-123 446.0 264 89.0
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 2.5e-123 445.7 264 89.0
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 5.7e-123 444.5 267 86.5
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.6e-122 443.0 264 87.9
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 3.7e-122 441.8 254 90.2
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 6.3e-122 441.0 268 86.2
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 8.2e-122 440.7 267 85.4
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 8.2e-122 440.7 254 89.8
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 7.9e-117 424.1 258 84.5
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 1.5e-107 393.3 254 79.5
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 5.0e-87 325.1 266 62.0
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 3.2e-86 322.4 233 67.4
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 5.5e-86 321.6 229 71.2
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 2.7e-85 319.3 232 66.4
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 4.7e-85 318.5 232 66.4
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 6.1e-85 318.2 232 69.4
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 8.0e-85 317.8 267 60.3
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 4.0e-84 315.5 232 65.9
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 5.2e-84 315.1 258 61.6
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 8.8e-84 314.3 231 65.8
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 1.2e-83 313.9 271 61.6
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 2.0e-83 313.2 270 60.0
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 2.0e-83 313.2 220 68.2
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 2.6e-83 312.8 227 67.8
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 3.4e-83 312.4 237 66.7
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 3.4e-83 312.4 232 66.4
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 3.4e-83 312.4 269 61.0
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 3.4e-83 312.4 231 64.5
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 5.7e-83 311.6 232 65.5
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 5.7e-83 311.6 228 66.7
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 5.7e-83 311.6 232 65.9
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 5.7e-83 311.6 230 67.0
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 9.8e-83 310.8 228 66.2
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 9.8e-83 310.8 232 65.1
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 9.8e-83 310.8 220 67.7
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.7e-82 310.1 223 65.9
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 2.2e-82 309.7 264 59.8
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 2.2e-82 309.7 228 68.9
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 4.9e-82 308.5 228 65.8
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 4.9e-82 308.5 230 66.1
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 4.9e-82 308.5 226 69.0
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 8.3e-82 307.8 234 65.0
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 8.3e-82 307.8 231 62.3
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 8.3e-82 307.8 223 66.8
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.1e-81 307.4 227 67.4
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 1.4e-81 307.0 234 62.4
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 1.4e-81 307.0 228 68.0
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 1.4e-81 307.0 223 66.8
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 2.4e-81 306.2 230 67.0
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 2.4e-81 306.2 241 61.8
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 4.1e-81 305.4 234 64.5
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 4.1e-81 305.4 235 65.5
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 4.1e-81 305.4 228 68.0
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 7.0e-81 304.7 238 63.4
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 1.6e-80 303.5 230 66.5
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 3.5e-80 302.4 224 63.8
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 3.5e-80 302.4 233 65.2
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 4.5e-80 302.0 225 64.0
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 5.9e-80 301.6 223 67.7
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 1.0e-79 300.8 231 63.2
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 1.0e-79 300.8 225 63.6
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 1.0e-79 300.8 225 63.6
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 1.0e-79 300.8 225 62.7
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 1.3e-79 300.4 233 62.2
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 1.7e-79 300.1 262 58.0
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 2.3e-79 299.7 219 65.3
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 6.6e-79 298.1 233 63.1
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 8.6e-79 297.7 227 65.2
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 1.5e-78 297.0 232 62.1
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.5e-78 296.2 225 63.1
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 7.3e-78 294.7 221 67.0
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 9.5e-78 294.3 236 61.9
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 9.5e-78 294.3 252 61.5
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.6e-77 293.5 225 65.3
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 2.1e-77 293.1 206 68.9
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 2.8e-77 292.7 235 60.9
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 8.0e-77 291.2 225 64.9
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.0e-76 290.8 259 57.5
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.0e-76 290.8 232 62.5
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 5.2e-76 288.5 231 64.9
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 6.8e-76 288.1 236 59.3
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 6.8e-76 288.1 236 59.3
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 8.9e-76 287.7 232 63.4
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 1.2e-75 287.3 227 62.6
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.2e-75 287.3 213 63.8
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 5.4e-73 278.5 219 61.6
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 1.6e-72 276.9 223 61.9
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.6e-71 271.6 226 60.2
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 2.1e-69 266.5 228 57.9
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 1.4e-68 263.8 198 66.7
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 2.3e-68 263.1 218 60.1
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 2.3e-68 263.1 224 58.0
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 6.8e-68 261.5 137 94.9
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 1.4e-65 253.8 406 38.7
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 1.5e-59 233.8 184 63.6
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 7.5e-59 231.5 227 52.9
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 1.1e-57 227.6 216 53.2
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 3.3e-54 216.1 198 53.5
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 7.3e-54 214.9 199 53.3
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 3.6e-53 212.6 219 50.7
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 3.6e-53 212.6 193 57.0
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 2.1e-45 186.8 128 71.1
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 8.4e-42 174.9 236 41.1
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.4e-33 146.7 98 70.4
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 1.2e-32 144.4 115 62.6
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 2.6e-27 126.7 116 53.4
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 6.9e-20 102.1 216 34.7
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.3e-18 97.8 73 61.6
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 1.3e-07 61.2 195 29.2
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 1.5e-06 57.8 168 26.8


User provided reference genes

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