Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g31660 Schrenkiella parvula HOM05D005941 ORTHO05D007879 6.0e-160 567.4 274 100.0
AT2G43260 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 5.3e-47 192.2 359 38.4
AL4G41930 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.7e-45 187.2 359 38.7
Carub.0004s2574 Capsella rubella HOM05D005941 ORTHO05D007879 1.4e-44 184.1 359 37.6
C04p04330 Brassica napus HOM05D005941 ORTHO05D007879 4.2e-44 182.6 361 35.2
BolC4t22069H Brassica oleracea HOM05D005941 ORTHO05D007879 4.2e-44 182.6 361 35.2
BcaNung06618 Brassica carinata HOM05D005941 ORTHO05D007879 1.6e-43 180.6 349 36.7
C04p04390 Brassica napus HOM05D005941 ORTHO05D007879 3.5e-43 179.5 363 34.7
BolC4t22072H Brassica oleracea HOM05D005941 ORTHO05D007879 3.5e-43 179.5 363 34.7
BraA05t19357Z Brassica rapa HOM05D005941 ORTHO05D007879 3.5e-43 179.5 361 34.9
BcaNung06467 Brassica carinata HOM05D005941 ORTHO05D007879 1.0e-42 177.9 364 34.9
A05p03700 Brassica napus HOM05D005941 ORTHO05D007879 8.7e-42 174.9 361 34.6
BolC5t29472H Brassica oleracea HOM05D005941 ORTHO05D007879 1.1e-41 174.5 295 40.7
AL4G34310 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.5e-41 173.3 363 37.5
C05p07170 Brassica napus HOM05D005941 ORTHO05D007879 3.7e-40 169.5 319 37.9
Thhalv10001524m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 6.2e-40 168.7 322 36.0
BcaC05g24772 Brassica carinata HOM05D005941 ORTHO05D007879 1.2e-38 164.5 204 46.1
Thhalv10027244m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 4.5e-38 162.5 342 35.4
AT2G43445 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 9.9e-38 161.4 191 45.5
BolC4t28542H Brassica oleracea HOM05D005941 ORTHO05D007879 9.9e-38 161.4 286 37.8
AL4G41950 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.7e-37 160.6 295 37.6
BraA03t14163Z Brassica rapa HOM05D005941 ORTHO05D007879 1.6e-35 154.1 335 33.4
Carub.0007s2358 Capsella rubella HOM05D005941 ORTHO05D007879 2.7e-35 153.3 208 42.8
BcaNung04033 Brassica carinata HOM05D005941 ORTHO05D007879 3.5e-35 152.9 209 43.5
AL7G36780 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.3e-34 150.2 209 43.5
A03p50720 Brassica napus HOM05D005941 ORTHO05D007879 3.9e-34 149.4 349 32.4
AT4G17780 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 7.4e-33 145.2 317 37.2
AT2G43440 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 9.6e-33 144.8 193 41.5
BcaC06g33593 Brassica carinata HOM05D005941 ORTHO05D007879 9.6e-33 144.8 209 43.5
BolC7t45422H Brassica oleracea HOM05D005941 ORTHO05D007879 9.6e-33 144.8 209 43.5
Carub.0004s1931 Capsella rubella HOM05D005941 ORTHO05D007879 2.1e-32 143.7 204 42.2
CARHR224500 Cardamine hirsuta HOM05D005941 ORTHO05D007879 3.7e-32 142.9 198 43.9
BcaB01g03386 Brassica carinata HOM05D005941 ORTHO05D007879 1.1e-31 141.4 194 42.8
AL4G42130 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 5.3e-31 139.0 262 37.8
Thhalv10016716m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 9.0e-31 138.3 204 39.2
C04p04430 Brassica napus HOM05D005941 ORTHO05D007879 2.2e-29 133.7 270 32.6
BolC4t22076H Brassica oleracea HOM05D005941 ORTHO05D007879 2.2e-29 133.7 270 32.6
Thhalv10029368m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 9.3e-28 128.3 187 40.6
BolC4t28544H Brassica oleracea HOM05D005941 ORTHO05D007879 1.2e-27 127.9 201 39.8
AL4G42220 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.7e-27 126.7 205 38.5
AL4G37620 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 5.1e-26 122.5 214 38.8
BraA04t18733Z Brassica rapa HOM05D005941 ORTHO05D007879 8.7e-26 121.7 201 38.8
C04p70400 Brassica napus HOM05D005941 ORTHO05D007879 4.3e-25 119.4 187 39.0
BcaB06g28634 Brassica carinata HOM05D005941 ORTHO05D007879 5.7e-25 119.0 199 35.7
A06p37200 Brassica napus HOM05D005941 ORTHO05D007879 2.2e-24 117.1 203 39.9
BraA07t29061Z Brassica rapa HOM05D005941 ORTHO05D007879 3.7e-24 116.3 183 38.8
BraA06t26643Z Brassica rapa HOM05D005941 ORTHO05D007879 6.3e-24 115.5 201 38.8
BcaC02g08826 Brassica carinata HOM05D005941 ORTHO05D007879 8.2e-24 115.2 246 35.4
Thhalv10016886m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 8.2e-24 115.2 198 38.9
BcaC06g35151 Brassica carinata HOM05D005941 ORTHO05D007879 1.8e-23 114.0 184 38.6
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.4e-23 113.6 336 32.7
AT2G43270 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 2.4e-23 113.6 128 49.2
A03p07450 Brassica napus HOM05D005941 ORTHO05D007879 2.4e-23 113.6 204 36.3
BraA03t10074Z Brassica rapa HOM05D005941 ORTHO05D007879 2.4e-23 113.6 204 36.3
BolC7t42414H Brassica oleracea HOM05D005941 ORTHO05D007879 3.1e-23 113.2 184 38.6
BcaB06g29313 Brassica carinata HOM05D005941 ORTHO05D007879 4.1e-23 112.8 210 35.7
BcaC06g35147 Brassica carinata HOM05D005941 ORTHO05D007879 5.3e-23 112.5 184 38.6
BolC7t42451H Brassica oleracea HOM05D005941 ORTHO05D007879 5.3e-23 112.5 184 38.6
BraA04t18033Z Brassica rapa HOM05D005941 ORTHO05D007879 5.3e-23 112.5 188 38.3
A04p25300 Brassica napus HOM05D005941 ORTHO05D007879 9.0e-23 111.7 190 37.4
BcaB03g14064 Brassica carinata HOM05D005941 ORTHO05D007879 1.5e-22 110.9 305 30.2
C03p08500 Brassica napus HOM05D005941 ORTHO05D007879 1.5e-22 110.9 236 32.2
BolC3t13355H Brassica oleracea HOM05D005941 ORTHO05D007879 1.5e-22 110.9 236 32.2
Carub.0004s1440 Capsella rubella HOM05D005941 ORTHO05D007879 2.6e-22 110.2 206 38.8
AT1G49790 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 3.4e-22 109.8 188 36.7
C07p19050 Brassica napus HOM05D005941 ORTHO05D007879 3.4e-22 109.8 184 38.0
BolC3t15077H Brassica oleracea HOM05D005941 ORTHO05D007879 4.5e-22 109.4 201 35.8
BcaB02g10128 Brassica carinata HOM05D005941 ORTHO05D007879 5.9e-22 109.0 192 33.9
BcaB03g14065 Brassica carinata HOM05D005941 ORTHO05D007879 1.0e-21 108.2 306 30.7
BolC4t26593H Brassica oleracea HOM05D005941 ORTHO05D007879 1.7e-21 107.5 194 38.7
BcaNung06466 Brassica carinata HOM05D005941 ORTHO05D007879 2.9e-21 106.7 197 36.0
BcaB01g03544 Brassica carinata HOM05D005941 ORTHO05D007879 3.8e-21 106.3 232 32.8
A07p12860 Brassica napus HOM05D005941 ORTHO05D007879 1.1e-20 104.8 164 37.8
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 1.9e-20 104.0 189 36.5
BcaC01g05402 Brassica carinata HOM05D005941 ORTHO05D007879 2.5e-20 103.6 191 36.6
C03p26950 Brassica napus HOM05D005941 ORTHO05D007879 2.5e-20 103.6 191 36.6
C03p26250 Brassica napus HOM05D004167 ORTHO05D005012 3.2e-20 103.2 216 33.8
BolC3t15010H Brassica oleracea HOM05D004167 ORTHO05D005012 3.2e-20 103.2 216 33.8
BcaC01g05484 Brassica carinata HOM05D005941 ORTHO05D007879 4.2e-20 102.8 197 33.5
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 9.3e-20 101.7 123 44.7
BcaB03g14061 Brassica carinata HOM05D005941 ORTHO05D007879 1.6e-19 100.9 137 42.3
CARHR138350 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.1e-19 100.5 70 64.3
CARHR134120 Cardamine hirsuta HOM05D005941 ORTHO05D007879 6.1e-19 99.0 188 34.6
CARHR130490 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.8e-18 97.4 193 35.2
C04p62360 Brassica napus HOM05D005941 ORTHO05D007879 1.5e-17 94.4 129 40.3
C03p26940 Brassica napus HOM05D005941 ORTHO05D007879 4.3e-17 92.8 169 37.3
CARHR138330 Cardamine hirsuta HOM05D005941 ORTHO05D007879 9.7e-17 91.7 277 31.0
BcaC02g12406 Brassica carinata HOM05D005941 ORTHO05D007879 2.2e-16 90.5 283 26.5
AT2G30385 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 6.9e-15 85.5 202 27.2
A04p32700 Brassica napus HOM05D012296 ORTHO05D014409 6.9e-15 85.5 226 32.3
BcaC02g12405 Brassica carinata HOM05D005941 ORTHO05D007879 1.3e-13 81.3 68 52.9
CARHR138480 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.4e-12 77.8 142 38.0
C04p50000 Brassica napus HOM05D005941 ORTHO05D007879 1.6e-11 74.3 156 36.5
BcaB06g28637 Brassica carinata HOM05D005941 ORTHO05D007879 3.6e-11 73.2 125 36.0
BolC4t27710H Brassica oleracea HOM05D005941 ORTHO05D007879 6.1e-11 72.4 115 36.5
BolC7t42445H Brassica oleracea HOM05D005941 ORTHO05D007879 5.1e-10 69.3 106 39.6
CARHR049850 Cardamine hirsuta HOM05D005941 ORTHO05D007879 8.8e-10 68.6 170 30.6
BolC4t22067H Brassica oleracea HOM05D005941 ORTHO05D033777 2.6e-09 67.0 58 60.3
AL5G41700 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 3.3e-09 66.6 230 26.5
C03p08630 Brassica napus HOM05D005941 ORTHO05D007879 7.4e-09 65.5 153 31.4
BcaC01g05404 Brassica carinata HOM05D005941 ORTHO05D007879 1.3e-08 64.7 158 32.3
CARHR061710 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.7e-08 64.3 120 38.3
BraA05t19356Z Brassica rapa HOM05D005941 ORTHO05D033777 3.7e-08 63.2 44 68.2
CARHR134100 Cardamine hirsuta HOM05D005941 ORTHO05D007879 3.7e-08 63.2 107 38.3
C07p19310 Brassica napus HOM05D005941 ORTHO05D007879 1.1e-07 61.6 189 28.0
BcaC02g07181 Brassica carinata HOM05D005941 ORTHO05D007879 1.8e-07 60.8 116 37.1
AL1G47910 Arabidopsis lyrata HOM05D001738 ORTHO05D011550 5.3e-07 59.3 131 38.2
Carub.0001s3170 Capsella rubella HOM05D001738 ORTHO05D001644 6.9e-07 58.9 149 32.2
BraA05t21312Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-06 58.2 156 32.7
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-06 57.8 141 27.0
THA.LOC104805835 Tarenaya hassleriana HOM05D001738 ORTHO05D001644 2.0e-06 57.4 151 26.5
C04p04310 Brassica napus HOM05D005941 ORTHO05D033777 7.7e-06 55.5 49 61.2
Thhalv10005447m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 7.7e-06 55.5 186 31.2


User provided reference genes

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