Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g31410 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.0e-137 491.1 248 100.0
Sp3g22620 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.2e-59 232.6 132 84.8
SpUn0027_0100 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.2e-59 232.6 132 84.8
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.3e-56 222.6 143 76.2
Sp6g13440 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.1e-49 198.7 125 76.8
BcaC03g16345 Brassica carinata HOM05D008905 ORTHO05D000002 4.8e-47 192.2 134 67.9
BcaC02g07698 Brassica carinata HOM05D008905 ORTHO05D000002 3.1e-46 189.5 129 71.3
Sp1g32560 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.2e-45 187.6 132 70.5
BcaNung00402 Brassica carinata HOM05D008905 ORTHO05D000002 3.4e-45 186.0 115 73.9
Sp6g16040 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.0e-33 147.9 84 81.0
Sp7g09030 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.5e-29 132.5 90 72.2
AL7G36470 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 7.1e-27 125.2 112 50.0
Sp5g17370 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-24 117.9 116 50.9
SpUn0001_0220 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.3e-22 109.0 128 43.0
Sp3g28830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.3e-20 104.4 128 39.1
Sp3g28500 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.9e-19 100.5 125 37.6
BcaB04g17630 Brassica carinata HOM05D008905 ORTHO05D000002 3.2e-19 99.8 123 38.2
Sp2g06690 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.2e-19 99.8 108 44.4
CARHR218060 Cardamine hirsuta HOM05D008905 ORTHO05D000002 1.4e-17 94.4 75 60.0
Sp4g05780 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.5e-16 90.9 113 38.9
CARHR263960 Cardamine hirsuta HOM05D008905 ORTHO05D000002 5.7e-16 89.0 123 37.4
THA.LOC104798668 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 1.7e-15 87.4 137 30.7
AL6G32420 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 8.2e-15 85.1 116 37.9
BcaC02g11045 Brassica carinata HOM05D014061 ORTHO05D000002 2.4e-14 83.6 120 35.0
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.3e-14 82.4 147 31.3
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-13 79.7 111 35.1
BcaB05g23469 Brassica carinata HOM05D008905 ORTHO05D000002 4.5e-13 79.3 110 37.3
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-12 77.0 103 34.0
A03p10320 Brassica napus HOM05D008905 ORTHO05D000002 3.8e-12 76.3 122 33.6
Sp6g23650 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.8e-12 76.3 123 33.3
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 6.5e-12 75.5 115 33.0
TPR.G21966 Trifolium pratense HOM05D001021 ORTHO05D000894 2.5e-11 73.6 134 31.3
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.2e-11 73.2 123 33.3
Sabra15G0047100 Salix brachista HOM05D000113 ORTHO05D001108 3.2e-11 73.2 99 35.4
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 3.2e-11 73.2 141 30.5
Sp5g17430 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.2e-11 72.0 84 45.2
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.2e-10 71.2 107 32.7
ECA238G4415 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 70.9 101 33.7
C03p11850 Brassica napus HOM05D008905 ORTHO05D000002 2.1e-10 70.5 122 31.1
BolC3t13655H Brassica oleracea HOM05D008905 ORTHO05D000002 2.1e-10 70.5 122 31.1
COL.COLO4_24818 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.1e-10 70.5 110 31.8
Sp3g27120 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.7e-10 70.1 111 35.1
ECA042G0002 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-10 69.7 124 28.2
BcaC08g46669 Brassica carinata HOM05D008905 ORTHO05D000002 7.9e-10 68.6 91 38.5
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.9e-10 68.6 100 36.0
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.4e-09 67.8 104 34.6
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-09 67.8 104 34.6
Sp7g10840 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.4e-09 67.8 73 41.1
COL.COLO4_12903 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-09 66.6 109 31.2
COL.COLO4_36747 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-09 66.6 113 31.9
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.1e-09 65.9 127 28.3
MD14G1073100 Malus domestica HOM05D001739 ORTHO05D000002 5.1e-09 65.9 107 29.9
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 8.8e-09 65.1 113 30.1
COL.COLO4_20202 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.8e-09 65.1 121 31.4
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.8e-09 65.1 112 28.6
ECA247G3996 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.8e-09 65.1 112 31.2
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 1.1e-08 64.7 119 33.6
ClCG03G010050 Citrullus lanatus HOM05D016213 ORTHO05D000002 1.1e-08 64.7 107 28.0
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-08 64.7 110 30.0
ClCG05G016400 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.0e-08 63.9 115 31.3
ClCG09G014290 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.0e-08 63.9 93 33.3
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 2.6e-08 63.5 118 32.2
ECA232G3180 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-08 63.5 118 32.2
ECA232G4751 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-08 63.5 118 32.2
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.6e-08 63.5 131 29.0
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 3.3e-08 63.2 126 30.2
ClCG06G009980 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.7e-08 62.4 109 31.2
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 5.7e-08 62.4 131 27.5
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 5.7e-08 62.4 99 34.3
TPR.G7895 Trifolium pratense HOM05D000004 ORTHO05D000048 5.7e-08 62.4 112 31.2
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 5.7e-08 62.4 101 31.7
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 5.7e-08 62.4 108 27.8
Sp4g07510 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.4e-08 62.0 123 29.3
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 9.7e-08 61.6 99 35.4
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 1.3e-07 61.2 108 33.3
CsaV3_5G014330 Cucumis sativus L. HOM05D000256 ORTHO05D000002 1.3e-07 61.2 80 37.5
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 1.3e-07 61.2 93 34.4
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 97 30.9
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 97 30.9
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 97 30.9
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 1.7e-07 60.8 180 26.1
CsaV3_5G037150 Cucumis sativus L. HOM05D016213 ORTHO05D000002 1.7e-07 60.8 108 30.6
CsaV3_6G019140 Cucumis sativus L. HOM05D016213 ORTHO05D000002 1.7e-07 60.8 108 31.5
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-07 60.5 112 26.8
HanXRQChr05g0142391 Helianthus annuus HOM05D003122 ORTHO05D000002 2.2e-07 60.5 128 28.9
Psat0s2139g0080 Pisum sativum HOM05D003122 ORTHO05D000002 2.2e-07 60.5 93 34.4
Psat5g012320 Pisum sativum HOM05D003122 ORTHO05D011729 2.2e-07 60.5 89 36.0
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-07 60.5 108 29.6
Atru.chr7.1185 Acer truncatum HOM05D000004 ORTHO05D000002 2.8e-07 60.1 99 37.4
C03p35060 Brassica napus HOM05D008905 ORTHO05D000002 2.8e-07 60.1 91 34.1
VMungo1127G0254 Vigna mungo HOM05D002312 ORTHO05D007981 2.8e-07 60.1 110 30.9
Psat1g124160 Pisum sativum HOM05D003122 ORTHO05D000002 3.7e-07 59.7 124 31.5
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 3.7e-07 59.7 104 31.7
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 3.7e-07 59.7 97 32.0
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 4.8e-07 59.3 112 33.0
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 4.8e-07 59.3 156 26.3
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 4.8e-07 59.3 86 34.9
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 4.8e-07 59.3 110 30.9
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 4.8e-07 59.3 93 32.3
Ca_12199_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.3e-07 58.9 88 35.2
Sp6g10530 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.3e-07 58.9 123 31.7
TPR.G6317 Trifolium pratense HOM05D000004 ORTHO05D000002 6.3e-07 58.9 103 30.1
COL.COLO4_28963 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.2e-07 58.5 91 33.0
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.2e-07 58.5 120 27.5
Psat1g019880 Pisum sativum HOM05D000001 ORTHO05D000003 8.2e-07 58.5 85 34.1
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 8.2e-07 58.5 112 31.2
SEGI_09038 Sequoiadendron giganteum HOM05D018674 ORTHO05D020861 8.2e-07 58.5 141 29.1
TWI23G0229 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.2e-07 58.5 121 30.6
Psat0s2745g0200 Pisum sativum HOM05D003122 ORTHO05D000002 1.1e-06 58.2 93 33.3
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-06 58.2 89 31.5
Sp4g02590 Schrenkiella parvula HOM05D014061 ORTHO05D000002 1.1e-06 58.2 98 35.7
Sp7g06650 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.1e-06 58.2 125 29.6
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 108 32.4
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 108 32.4
Oeu015199.1 Olea europaea HOM05D000004 ORTHO05D000002 1.4e-06 57.8 108 31.5
Psat5g010600 Pisum sativum HOM05D003122 ORTHO05D011729 1.4e-06 57.8 89 34.8
Sp5g19760 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.4e-06 57.8 30 83.3
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-06 57.4 103 31.1
Psat0s2699g0160 Pisum sativum HOM05D003122 ORTHO05D000002 1.8e-06 57.4 85 35.3
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-06 57.4 103 32.0
Ca_22816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.4e-06 57.0 128 25.8
COL.COLO4_09232 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.4e-06 57.0 110 35.5
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 2.4e-06 57.0 104 27.9
QL02p059512 Quercus lobata HOM05D000004 ORTHO05D000002 2.4e-06 57.0 126 27.8
THA.LOC104824625 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-06 57.0 70 37.1
COL.COLO4_36693 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.1e-06 56.6 110 29.1
FvH4_6g16962 Fragaria vesca HOM05D000004 ORTHO05D000002 3.1e-06 56.6 96 31.2
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 3.1e-06 56.6 114 29.8
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 3.1e-06 56.6 108 34.3
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.1e-06 56.2 112 25.9
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 4.1e-06 56.2 123 26.0
Lj6C267T0 Lonicera japonica HOM05D000004 ORTHO05D000002 4.1e-06 56.2 108 30.6
Psat4g087200 Pisum sativum HOM05D003122 ORTHO05D011729 4.1e-06 56.2 85 32.9
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 4.1e-06 56.2 108 27.8
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 5.3e-06 55.8 110 27.3
Ca_04779_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.3e-06 55.8 96 32.3
Ca_13687_v3 Cicer arietinum L. HOM05D001855 ORTHO05D002034 5.3e-06 55.8 94 33.0
Ca_26814_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.3e-06 55.8 112 27.7
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-06 55.8 76 34.2
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 55.8 109 25.7
Psat1g036880 Pisum sativum HOM05D000004 ORTHO05D000002 5.3e-06 55.8 108 28.7
Psat5g251080 Pisum sativum HOM05D000004 ORTHO05D000002 5.3e-06 55.8 94 29.8
Ca_27235_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.0e-06 55.5 126 28.6
ECA248G1389 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-06 55.5 73 34.2
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-06 55.5 85 31.8
Sopen05g018990 Solanum pennellii HOM05D000002 ORTHO05D000002 7.0e-06 55.5 103 32.0
Sopen08g014180 Solanum pennellii HOM05D000004 ORTHO05D000002 7.0e-06 55.5 134 31.3
arahy.Tifrunner.gnm1.ann1.K49PTT Arachis hypogaea HOM05D000004 ORTHO05D000002 9.1e-06 55.1 108 28.7
BcaC04g21337 Brassica carinata HOM05D014061 ORTHO05D000002 9.1e-06 55.1 70 37.1
ECA246G3513 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.1e-06 55.1 107 31.8
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.1e-06 55.1 104 29.8
Psat0s2641g0200 Pisum sativum HOM05D003122 ORTHO05D008070 9.1e-06 55.1 86 33.7
Psat5g243520 Pisum sativum HOM05D003122 ORTHO05D011729 9.1e-06 55.1 69 37.7
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 9.1e-06 55.1 100 30.0
TPR.G37411 Trifolium pratense HOM05D000004 ORTHO05D000002 9.1e-06 55.1 109 26.6
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.1e-06 55.1 93 30.1


User provided reference genes

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