Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g31230 Schrenkiella parvula HOM05D000003 ORTHO05D000283 1.7e-84 315.8 148 100.0
BraA09t38940Z Brassica rapa HOM05D000003 ORTHO05D000283 1.4e-17 93.6 170 31.8
AL1G41870 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.5e-16 90.1 170 34.7
BcaB02g09394 Brassica carinata HOM05D000003 ORTHO05D000283 5.8e-16 88.2 165 32.7
BcaC08g44971 Brassica carinata HOM05D000003 ORTHO05D000004 2.9e-15 85.9 168 31.0
BcaNung03504 Brassica carinata HOM05D000003 ORTHO05D027488 2.4e-14 82.8 164 32.9
AL1G56200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 9.2e-14 80.9 147 33.3
BolC7t43339H Brassica oleracea HOM05D000003 ORTHO05D000283 2.7e-13 79.3 167 29.9
BolC2t07536H Brassica oleracea HOM05D000003 ORTHO05D000283 3.5e-13 79.0 164 34.1
BraA01t01398Z Brassica rapa HOM05D000003 ORTHO05D000283 3.5e-13 79.0 167 31.1
Sp2g02500 Schrenkiella parvula HOM05D000003 ORTHO05D000283 3.5e-13 79.0 147 34.7
BcaB02g08653 Brassica carinata HOM05D000003 ORTHO05D000283 6.0e-13 78.2 169 31.4
BraA07t28299Z Brassica rapa HOM05D000003 ORTHO05D000283 6.0e-13 78.2 164 32.9
BcaB03g13757 Brassica carinata HOM05D000003 ORTHO05D000283 7.8e-13 77.8 169 30.2
BcaC06g33754 Brassica carinata HOM05D000003 ORTHO05D000283 7.8e-13 77.8 131 35.9
C08p07500 Brassica napus HOM05D000003 ORTHO05D000283 7.8e-13 77.8 177 27.7
BcaC05g25052 Brassica carinata HOM05D000003 ORTHO05D000283 8.6e-12 74.3 150 30.7
BolC1t03920H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-11 73.9 169 27.8
AL3G43240 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.5e-11 73.6 54 59.3
BolC1t01970H Brassica oleracea HOM05D000003 ORTHO05D000283 1.5e-11 73.6 175 28.6
BolC4t28361H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-11 72.8 164 26.2
BolC6t37177H Brassica oleracea HOM05D000003 ORTHO05D000283 2.5e-11 72.8 167 27.5
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 4.3e-11 72.0 164 32.9
BcaC04g19019 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-10 69.7 54 53.7
BolC5t32204H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-10 69.7 165 30.9
BcaC03g17941 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-10 69.3 165 30.3
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-10 68.9 176 26.7
BcaC09g50223 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-10 68.2 148 28.4
C04p09320 Brassica napus HOM05D000003 ORTHO05D000283 3.1e-09 65.9 57 45.6
BraA09t37875Z Brassica rapa HOM05D000003 ORTHO05D000004 4.0e-09 65.5 164 28.7
Sp6g11620 Schrenkiella parvula HOM05D011239 ORTHO05D008901 4.0e-09 65.5 48 64.6
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 2.0e-08 63.2 61 41.0
BolC5t31190H Brassica oleracea HOM05D000003 ORTHO05D000283 2.6e-08 62.8 54 48.1
C05p51170 Brassica napus HOM05D000003 ORTHO05D000283 5.8e-08 61.6 54 44.4
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 9.9e-08 60.8 147 26.5
BcaC03g13447 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-07 60.5 148 25.7
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-07 60.5 160 27.5
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 2.2e-07 59.7 164 26.2
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.2e-07 59.7 166 24.7
Aa31LG3G8770 Aethionema arabicum HOM05D000003 ORTHO05D000283 2.9e-07 59.3 164 23.2
BraA08t32771Z Brassica rapa HOM05D000003 ORTHO05D000283 2.9e-07 59.3 52 50.0
A02p04600 Brassica napus HOM05D000003 ORTHO05D000283 4.9e-07 58.5 149 30.9
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 4.9e-07 58.5 164 26.2
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 6.4e-07 58.2 60 40.0
BcaB04g17106 Brassica carinata HOM05D038619 ORTHO05D011028 6.4e-07 58.2 132 29.5
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.4 161 25.5
BcaNung03095 Brassica carinata HOM05D000003 ORTHO05D000283 1.1e-06 57.4 54 42.6
BolC9t55722H Brassica oleracea HOM05D000003 ORTHO05D000283 1.4e-06 57.0 164 25.0
BcaC07g37299 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-06 56.6 138 29.7
Carub.0007s1219 Capsella rubella HOM05D000003 ORTHO05D000283 1.9e-06 56.6 153 25.5
BcaB02g10118 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 168 28.0
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-06 56.2 57 40.4
BcaB06g29407 Brassica carinata HOM05D000003 ORTHO05D000283 3.2e-06 55.8 167 27.5
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 3.2e-06 55.8 162 21.0
C09p20360 Brassica napus HOM05D000003 ORTHO05D000283 4.2e-06 55.5 164 23.2
BolC9t54942H Brassica oleracea HOM05D000003 ORTHO05D000283 4.2e-06 55.5 164 23.2
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 5.4e-06 55.1 54 35.2
AT5G18880 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 7.1e-06 54.7 152 29.6
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 9.2e-06 54.3 149 24.8
BolC3t20403H Brassica oleracea HOM05D000003 ORTHO05D000283 9.2e-06 54.3 63 42.9


User provided reference genes

Program Settings