Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 3.6e-68 261.9 181 100.0
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 4.8e-65 251.5 181 96.1
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 8.2e-65 250.8 181 92.3
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 5.9e-63 244.6 182 73.6
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 1.3e-62 243.4 181 93.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 1.3e-62 243.4 181 93.9
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.7e-62 243.0 179 93.9
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 2.2e-62 242.7 180 93.3
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 5.0e-62 241.5 179 91.6
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 6.5e-62 241.1 182 72.5
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 6.5e-62 241.1 182 72.5
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 3.2e-61 238.8 177 92.1
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 6.5e-54 214.5 177 87.0
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.1e-53 213.8 183 84.2
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 1.9e-53 213.0 177 85.9
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 3.2e-53 212.2 176 85.8
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 1.2e-52 210.3 176 82.4
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 1.2e-52 210.3 179 76.5
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.0e-51 207.2 176 83.5
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.0e-51 207.2 179 84.9
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 1.8e-51 206.5 177 62.7
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 4.0e-51 205.3 176 80.7
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 5.2e-51 204.9 176 84.1
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 5.2e-51 204.9 181 82.9
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.8e-51 204.5 176 84.1
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 8.8e-51 204.1 177 84.7
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 2.0e-50 203.0 176 80.7
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 3.4e-50 202.2 176 80.7
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.4e-50 201.8 176 83.0
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 5.7e-50 201.4 176 83.0
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 5.7e-50 201.4 176 80.7
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 7.5e-50 201.1 176 80.1
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 7.5e-50 201.1 176 81.8
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 7.5e-50 201.1 176 81.8
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 9.8e-50 200.7 176 83.0
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.7e-49 199.9 176 81.8
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 2.2e-49 199.5 176 78.4
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 2.8e-49 199.1 176 76.7
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 4.8e-49 198.4 176 83.5
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 6.3e-49 198.0 176 79.0
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.1e-48 197.2 176 77.3
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 1.4e-48 196.8 176 79.5
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 1.4e-48 196.8 176 82.4
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 2.4e-48 196.1 176 76.7
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 2.4e-48 196.1 176 80.7
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 4.1e-48 195.3 176 81.8
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 7.0e-48 194.5 176 80.7
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 9.1e-48 194.1 176 59.1
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 9.1e-48 194.1 176 79.0
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 9.1e-48 194.1 176 80.1
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 9.1e-48 194.1 176 80.1
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 1.2e-47 193.7 181 76.2
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 1.2e-47 193.7 176 79.5
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 1.6e-47 193.4 176 79.5
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 2.0e-47 193.0 179 77.7
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.0e-47 193.0 176 80.1
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.0e-47 193.0 175 82.3
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 2.7e-47 192.6 176 80.1
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.7e-47 192.6 176 80.1
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 4.5e-47 191.8 176 79.0
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 5.9e-47 191.4 179 72.6
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 7.7e-47 191.0 176 80.1
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.0e-46 190.7 176 81.8
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 2.3e-46 189.5 176 79.5
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 2.3e-46 189.5 176 79.5
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 2.9e-46 189.1 176 79.5
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 6.6e-46 188.0 176 79.5
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 8.6e-46 187.6 176 80.7
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 8.6e-46 187.6 176 79.0
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 1.5e-45 186.8 176 79.5
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 1.5e-45 186.8 176 77.8
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 2.5e-45 186.0 250 46.4
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 7.2e-45 184.5 176 77.8
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.2e-44 183.7 176 79.0
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 2.1e-44 183.0 176 79.5
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 2.8e-44 182.6 197 73.6
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 3.6e-44 182.2 176 78.4
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.8e-43 179.9 179 76.0
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 1.8e-43 179.9 178 74.7
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 3.0e-43 179.1 179 55.9
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 6.8e-43 177.9 176 76.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 8.9e-43 177.6 199 50.8
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 7.5e-42 174.5 157 82.8
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 2.8e-41 172.6 181 72.4
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 3.1e-40 169.1 176 50.6
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.2e-39 167.2 176 75.0
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 4.5e-39 165.2 176 72.7
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 7.8e-39 164.5 197 46.7
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 6.6e-38 161.4 180 48.9
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 4.3e-37 158.7 206 59.7
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 5.6e-37 158.3 181 49.7
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 5.2e-35 151.8 161 75.8
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 2.0e-34 149.8 175 51.4
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 3.4e-34 149.1 180 42.8
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 4.4e-34 148.7 87 81.6
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 7.5e-34 147.9 84 81.0
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 4.9e-33 145.2 141 70.9
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 6.4e-33 144.8 176 69.3
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 8.3e-33 144.4 140 80.7
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 8.3e-33 144.4 172 48.8
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 1.1e-32 144.1 153 49.0
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 4.1e-32 142.1 177 63.8
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 1.2e-31 140.6 176 44.9
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.0e-31 139.8 168 70.8
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 6.0e-31 138.3 140 81.4
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 7.8e-31 137.9 168 70.2
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 7.8e-31 137.9 176 47.2
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.7e-30 136.7 87 74.7
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.5e-29 132.9 88 73.9
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 4.3e-29 132.1 149 53.7
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 7.3e-29 131.3 88 72.7
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.1e-28 129.8 142 77.5
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.3e-25 120.6 87 64.4
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 3.7e-25 119.0 125 72.0
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 6.6e-22 108.2 215 37.2
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 3.3e-21 105.9 124 48.4
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 2.3e-19 99.8 120 48.3
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.9e-18 94.4 167 38.3
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 1.5e-13 80.5 116 38.8
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 5.8e-10 68.6 100 44.0
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 1.4e-08 63.9 36 83.3
Nitab4.5_0011078g0020 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.1e-07 60.1 36 77.8
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 7.8e-07 58.2 36 77.8
Nitab4.5_0011078g0030 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.7e-06 57.0 36 72.2
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 2.3e-06 56.6 49 59.2


User provided reference genes

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