Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g30620 Schrenkiella parvula HOM05D009318 ORTHO05D014524 1.4e-133 479.6 231 100.0
Sp6g12020 Schrenkiella parvula HOM05D009318 ORTHO05D011482 6.2e-25 118.6 102 58.8
Thhalv10028145m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.2e-21 106.3 253 29.2
Thhalv10023101m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 9.6e-18 94.7 322 26.1
Thhalv10017584m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 6.2e-17 92.0 322 25.8
Thhalv10003036m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 4.5e-15 85.9 264 27.3
Thhalv10015794m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.3e-14 84.3 263 28.1
Thhalv10029364m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.3e-14 84.3 80 51.2
BcaB07g33313 Brassica carinata HOM05D009318 ORTHO05D014524 2.2e-14 83.6 80 46.2
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 3.8e-14 82.8 79 46.8
Sp4g06850 Schrenkiella parvula HOM05D009318 ORTHO05D008901 2.5e-13 80.1 65 61.5
Thhalv10023077m.g Eutrema salsugineum HOM05D000017 ORTHO05D014524 4.2e-13 79.3 305 23.3
Thhalv10000572m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 7.1e-13 78.6 80 47.5
Thhalv10003478m.g Eutrema salsugineum HOM05D000017 ORTHO05D014524 7.1e-13 78.6 103 44.7
C06p16630 Brassica napus HOM05D009318 ORTHO05D014524 2.1e-12 77.0 78 47.4
BolC8t47760H Brassica oleracea HOM05D009318 ORTHO05D014524 3.5e-12 76.3 64 54.7
BolC6t35389H Brassica oleracea HOM05D009318 ORTHO05D017596 4.6e-12 75.9 62 53.2
BolC9t55312H Brassica oleracea HOM05D009318 ORTHO05D014524 1.0e-11 74.7 62 56.5
BraA05t21064Z Brassica rapa HOM05D009318 ORTHO05D014524 3.0e-11 73.2 64 53.1
Sp4g05970 Schrenkiella parvula HOM05D009318 ORTHO05D008901 3.9e-11 72.8 100 44.0
BraA01t02763Z Brassica rapa HOM05D009318 ORTHO05D014524 2.5e-10 70.1 64 50.0
BolC5t32341H Brassica oleracea HOM05D009318 ORTHO05D014524 3.7e-09 66.2 80 42.5
A10p14530 Brassica napus HOM05D009010 ORTHO05D011482 8.2e-09 65.1 78 42.3
Aa31LG10G5600 Aethionema arabicum HOM05D009010 ORTHO05D011482 1.4e-08 64.3 63 41.3
Sp7g08600 Schrenkiella parvula HOM05D006786 ORTHO05D008901 2.4e-08 63.5 55 54.5
Sp3g26700 Schrenkiella parvula HOM05D009318 ORTHO05D008901 1.2e-07 61.2 110 38.2
Sp5g17830 Schrenkiella parvula HOM05D009318 ORTHO05D371601 1.2e-07 61.2 48 64.6
Thhalv10000682m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.3e-06 57.8 49 49.0
C04p39270 Brassica napus HOM05D000017 ORTHO05D000013 2.9e-06 56.6 51 52.9
BolC8t48408H Brassica oleracea HOM05D000017 ORTHO05D000013 3.8e-06 56.2 50 44.0
Thhalv10023136m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.8e-06 56.2 48 45.8
BcaC01g06688 Brassica carinata HOM05D009318 ORTHO05D017596 5.0e-06 55.8 53 50.9


User provided reference genes

Program Settings