Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.2e-64 248.8 125 100.0
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 1.7e-53 212.6 122 85.2
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 5.0e-53 211.1 122 84.4
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 5.0e-53 211.1 122 84.4
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 1.1e-52 209.9 122 83.6
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 1.1e-52 209.9 122 84.4
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 4.4e-49 198.0 124 82.3
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 6.3e-48 194.1 106 88.7
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 3.1e-47 191.8 104 85.6
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.2e-46 189.9 127 76.4
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.6e-46 189.5 126 81.0
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 5.0e-45 184.5 132 75.0
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 1.5e-36 156.4 137 64.2
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 7.5e-33 144.1 134 63.4
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 4.7e-27 124.8 102 62.7
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 8.0e-27 124.0 127 59.1
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.5e-25 119.8 120 57.5
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 2.6e-25 119.0 134 57.5
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.4e-25 118.6 120 57.5
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 5.8e-25 117.9 119 53.8
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 9.8e-25 117.1 132 56.1
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 9.8e-25 117.1 119 52.9
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.7e-24 116.3 120 56.7
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 2.2e-24 115.9 128 57.0
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 2.9e-24 115.5 122 57.4
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 3.7e-24 115.2 122 57.4
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 8.3e-24 114.0 100 62.0
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 1.1e-23 113.6 132 55.3
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 1.1e-23 113.6 132 55.3
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 1.9e-23 112.8 137 55.5
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 1.9e-23 112.8 137 55.5
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 1.9e-23 112.8 138 55.1
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 4.1e-23 111.7 128 50.8
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 1.2e-22 110.2 121 53.7
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 2.0e-22 109.4 106 56.6
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 2.7e-22 109.0 106 58.5
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 6.0e-22 107.8 117 48.7
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 6.0e-22 107.8 116 56.0
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 1.7e-21 106.3 126 48.4
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.7e-21 106.3 126 54.0
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 1.7e-21 106.3 126 54.0
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 2.3e-21 105.9 119 52.9
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 1.9e-20 102.8 129 51.9
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 3.3e-20 102.1 136 52.9
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 3.3e-20 102.1 106 52.8
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 7.3e-20 100.9 129 49.6
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 7.3e-20 100.9 118 52.5
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 9.5e-20 100.5 126 50.0
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 3.6e-19 98.6 106 53.8
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 6.2e-19 97.8 128 50.0
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 1.8e-18 96.3 126 48.4
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 2.3e-18 95.9 100 52.0
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 2.3e-18 95.9 134 48.5
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 4.0e-18 95.1 106 49.1
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 4.0e-18 95.1 98 54.1
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 4.0e-18 95.1 99 53.5
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 6.8e-18 94.4 101 53.5
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 2.0e-17 92.8 101 52.5
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 2.6e-17 92.4 98 50.0
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 2.2e-16 89.4 138 48.6
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 4.9e-16 88.2 118 44.9
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 3.2e-15 85.5 108 47.2
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 4.1e-15 85.1 114 44.7
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 9.2e-15 84.0 132 40.9
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.2e-14 83.6 96 47.9
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 3.5e-14 82.0 118 44.1
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 1.7e-13 79.7 101 48.5
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 5.1e-13 78.2 108 50.0
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 1.1e-12 77.0 77 51.9
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.9e-12 76.3 119 39.5
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 2.5e-12 75.9 110 43.6
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.5e-12 75.9 106 49.1
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 3.3e-12 75.5 110 46.4
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 1.6e-11 73.2 108 42.6
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 6.8e-10 67.8 99 42.4
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 2.0e-09 66.2 110 37.3
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 2.6e-09 65.9 79 50.6
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 2.2e-08 62.8 92 46.7
unitig_46.g17995 Utricularia gibba HOM05D007776 ORTHO05D009812 2.9e-08 62.4 90 37.8
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 8.3e-08 60.8 41 70.7
HanXRQChr05g0130261 Helianthus annuus HOM05D007776 ORTHO05D009812 4.1e-07 58.5 96 42.7
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 5.4e-07 58.2 91 41.8
unitig_747.g21557 Utricularia gibba HOM05D007776 ORTHO05D009812 1.2e-06 57.0 86 41.9


User provided reference genes

Program Settings