Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 2.4e-128 462.2 237 100.0
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.2e-119 433.3 237 92.8
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.2e-119 433.3 237 92.8
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 4.5e-119 431.4 237 92.4
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 5.8e-119 431.0 237 92.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 6.4e-118 427.6 237 91.6
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 2.8e-113 412.1 227 90.7
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 2.8e-113 412.1 238 88.7
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 3.7e-113 411.8 236 88.1
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.1e-112 410.2 237 88.6
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 1.8e-112 409.5 237 86.1
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 7.9e-108 394.0 237 83.1
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 1.5e-103 379.8 237 79.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 2.6e-87 325.9 235 66.8
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 3.4e-87 325.5 237 67.1
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.0e-86 323.9 235 66.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 2.2e-86 322.8 235 67.7
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.1e-85 320.5 235 66.4
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 2.5e-85 319.3 236 65.7
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 5.5e-85 318.2 234 66.2
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 3.6e-84 315.5 237 67.1
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.0e-83 313.9 237 65.4
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 3.9e-83 312.0 231 67.1
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 5.1e-83 311.6 237 65.8
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.0e-82 309.7 236 64.4
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 2.0e-82 309.7 233 64.4
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 2.6e-82 309.3 237 65.0
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 9.7e-82 307.4 224 68.3
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 1.3e-81 307.0 231 64.9
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 2.8e-81 305.8 237 61.2
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 3.7e-81 305.4 237 63.7
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 6.3e-81 304.7 232 65.9
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 8.2e-81 304.3 236 65.3
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 8.2e-81 304.3 234 63.7
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 1.1e-80 303.9 230 66.1
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.4e-80 303.5 236 61.9
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.8e-80 303.1 230 63.5
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 3.1e-80 302.4 226 64.2
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 4.1e-80 302.0 236 63.6
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 5.3e-80 301.6 240 62.9
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.2e-79 300.4 237 62.4
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 1.5e-79 300.1 213 68.5
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.5e-79 300.1 232 63.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.5e-79 300.1 231 63.6
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.5e-79 300.1 254 59.4
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 2.0e-79 299.7 237 63.3
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 2.0e-79 299.7 240 62.9
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 2.6e-79 299.3 214 68.7
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 3.5e-79 298.9 234 63.2
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 5.9e-79 298.1 236 61.4
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.0e-78 297.4 234 61.1
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.0e-78 297.4 234 60.7
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.0e-78 297.4 234 61.1
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.3e-78 297.0 237 62.4
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 2.2e-78 296.2 237 61.6
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.9e-78 295.8 234 60.7
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 2.9e-78 295.8 232 62.1
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 3.8e-78 295.4 234 60.3
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 6.5e-78 294.7 233 61.8
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 6.5e-78 294.7 226 64.2
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.5e-77 293.5 224 63.4
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.9e-77 293.1 227 62.6
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 2.5e-77 292.7 238 60.5
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.2e-77 292.4 234 61.5
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 4.7e-76 288.5 237 59.9
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.0e-75 287.3 237 59.9
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.8e-75 286.6 222 62.6
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 2.3e-75 286.2 216 64.8
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 2.3e-75 286.2 226 61.1
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 3.0e-75 285.8 225 61.3
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 3.9e-75 285.4 229 61.1
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 2.0e-74 283.1 227 60.8
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 2.6e-74 282.7 240 57.5
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 2.6e-74 282.7 236 60.6
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 1.3e-73 280.4 231 59.7
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 8.2e-73 277.7 229 59.4
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.1e-72 277.3 235 60.0
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.8e-72 276.6 220 62.7
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 2.0e-71 273.1 229 59.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.0e-71 273.1 232 59.5
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 2.0e-71 273.1 222 59.9
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 4.5e-71 271.9 229 57.6
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 4.5e-71 271.9 229 62.4
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 4.5e-71 271.9 221 59.7
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.7e-70 270.0 237 57.8
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 2.9e-70 269.2 222 59.5
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.8e-70 268.9 240 57.9
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 8.5e-70 267.7 238 55.0
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 3.2e-69 265.8 207 59.9
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.2e-68 263.8 238 55.5
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 6.1e-68 261.5 213 58.7
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 6.3e-65 251.5 255 52.9
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.1e-64 250.8 227 55.9
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 4.4e-58 228.8 231 50.6
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 2.4e-56 223.0 224 51.3
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 5.7e-50 201.8 188 54.3
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 1.3e-49 200.7 152 66.4
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 3.7e-49 199.1 152 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.3e-46 189.9 227 44.1
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 2.8e-44 183.0 212 43.4
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 3.1e-43 179.5 159 56.0
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 3.4e-42 176.0 149 56.4
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.0e-38 162.9 236 43.2
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 3.3e-37 159.5 221 38.0
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 6.2e-36 155.2 139 51.1
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 3.4e-34 149.4 219 36.5
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 9.8e-34 147.9 225 34.7
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 2.2e-33 146.7 226 34.1
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.9e-30 136.0 119 54.6
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.6e-28 130.6 89 67.4
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 4.9e-25 119.0 110 54.5
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 6.4e-25 118.6 163 38.0
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.9e-21 107.1 72 65.3
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.8e-19 100.5 218 31.2
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 5.3e-11 72.4 70 55.7
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 5.3e-11 72.4 70 55.7
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 1.6e-07 60.8 43 62.8
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 6.6e-06 55.5 91 33.0


User provided reference genes

Program Settings