Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.3e-54 216.1 104 100.0
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 4.2e-53 211.1 104 97.1
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 7.1e-53 210.3 104 97.1
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 9.3e-53 209.9 104 97.1
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 1.6e-52 209.1 104 96.2
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 4.6e-52 207.6 104 96.2
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 4.6e-52 207.6 104 95.2
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.3e-51 206.1 104 93.3
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 3.6e-49 198.0 104 90.4
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 4.8e-49 197.6 104 90.4
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 4.8e-49 197.6 104 90.4
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 8.1e-49 196.8 104 91.3
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 9.0e-48 193.4 104 85.6
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 2.3e-43 178.7 96 85.4
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 5.1e-43 177.6 96 84.4
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 1.1e-42 176.4 96 83.3
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 83.3
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 1.9e-42 175.6 94 86.2
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 84.4
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 1.9e-42 175.6 96 84.4
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 2.5e-42 175.3 94 86.2
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 5.6e-42 174.1 94 85.1
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 7.3e-42 173.7 94 84.0
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 83.3
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 83.3
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 9.6e-42 173.3 96 82.3
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 1.3e-41 172.9 96 82.3
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.3e-41 172.9 96 81.2
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.6e-41 172.6 93 84.9
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 1.6e-41 172.6 96 84.4
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 1.6e-41 172.6 94 83.0
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 1.6e-41 172.6 94 83.0
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 2.1e-41 172.2 94 84.0
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 81.2
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 2.8e-41 171.8 94 83.0
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.8e-41 171.8 96 81.2
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 3.6e-41 171.4 96 82.3
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 4.8e-41 171.0 97 81.4
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 4.8e-41 171.0 96 79.2
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 6.2e-41 170.6 94 81.9
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 8.1e-41 170.2 96 80.2
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 8.1e-41 170.2 94 81.9
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 1.4e-40 169.5 94 81.9
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 80.2
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 81.2
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 81.2
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 81.2
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 82.3
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 80.2
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 79.2
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 81.2
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.1e-40 168.3 96 79.2
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 4.0e-40 167.9 96 78.1
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 5.3e-40 167.5 95 82.1
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 79.2
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 79.2
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 6.9e-40 167.2 96 79.2
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 9.0e-40 166.8 96 79.2
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 9.0e-40 166.8 96 78.1
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 9.0e-40 166.8 98 78.6
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 78.1
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 1.2e-39 166.4 96 80.2
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 79.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.5e-39 166.0 96 78.1
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 1.5e-39 166.0 94 77.7
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 3.4e-39 164.9 96 78.1
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 4.5e-39 164.5 96 79.2
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 4.5e-39 164.5 93 80.6
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 4.5e-39 164.5 96 77.1
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 5.8e-39 164.1 93 81.7
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 7.6e-39 163.7 96 77.1
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 77.1
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 77.1
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 9.9e-39 163.3 93 79.6
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 9.9e-39 163.3 93 79.6
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 77.1
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 9.9e-39 163.3 96 76.0
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 1.3e-38 162.9 96 76.0
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 77.1
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.2e-38 162.2 96 77.1
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 2.9e-38 161.8 94 77.7
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 2.9e-38 161.8 96 75.0
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 3.8e-38 161.4 96 76.0
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 3.8e-38 161.4 94 77.7
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 6.4e-38 160.6 94 75.5
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.1e-37 159.8 96 76.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 2.4e-37 158.7 96 75.0
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-37 158.3 96 76.0
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 4.2e-37 157.9 91 78.0
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 5.4e-37 157.5 96 75.0
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 7.1e-37 157.1 96 74.0
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 7.1e-37 157.1 93 78.5
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 3.5e-36 154.8 99 68.7
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 4.6e-36 154.5 94 76.6
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 6.0e-36 154.1 111 68.5
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 7.9e-36 153.7 94 74.5
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 7.9e-36 153.7 94 74.5
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.0e-35 151.8 119 64.7
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.0e-35 151.8 119 64.7
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.0e-35 151.8 119 64.7
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 3.9e-35 151.4 129 59.7
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 5.1e-35 151.0 114 64.0
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 8.7e-35 150.2 96 72.9
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 1.1e-32 143.3 139 52.5
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 1.1e-32 143.3 139 52.5
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 3.1e-32 141.7 96 71.9
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 1.2e-31 139.8 84 73.8
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 9.3e-29 130.2 96 66.7
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 3.5e-28 128.3 72 80.6
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 2.9e-22 108.6 94 53.2
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 1.1e-21 106.7 93 53.8
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 3.3e-18 95.1 50 82.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 3.3e-18 95.1 50 82.0
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 6.3e-17 90.9 50 78.0
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 1.5e-15 86.3 59 66.1
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 3.4e-15 85.1 49 77.6
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 7.7e-15 84.0 53 71.7
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 2.9e-14 82.0 39 100.0
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 6.5e-14 80.9 47 76.6
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 8.2e-09 63.9 41 73.2


User provided reference genes

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