Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 4.0e-61 238.0 131 100.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 9.9e-52 206.8 131 89.3
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 2.4e-50 202.2 132 88.6
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 2.4e-50 202.2 132 88.6
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 5.4e-50 201.1 127 87.4
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 7.1e-50 200.7 125 88.8
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 7.1e-50 200.7 132 87.9
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 9.2e-50 200.3 132 87.9
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 9.2e-50 200.3 132 87.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.1e-48 194.5 121 88.4
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 6.6e-48 194.1 122 86.9
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 3.3e-47 191.8 121 89.3
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 7.3e-47 190.7 128 82.8
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.6e-44 182.2 118 82.2
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.9e-44 180.3 130 76.9
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.4e-36 155.2 124 69.4
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 2.4e-29 132.5 129 64.3
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.2e-28 130.2 131 61.1
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 2.0e-28 129.4 132 59.8
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.0e-28 129.4 132 59.1
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 3.4e-28 128.6 117 63.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 9.9e-28 127.1 124 56.5
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.7e-27 126.3 119 60.5
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.7e-27 126.3 120 59.2
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 2.2e-27 125.9 132 57.6
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 2.9e-27 125.6 104 68.3
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 2.9e-27 125.6 117 62.4
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.9e-27 125.6 120 61.7
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 3.8e-27 125.2 110 66.4
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 4.9e-27 124.8 109 70.6
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 4.9e-27 124.8 109 70.6
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 8.4e-27 124.0 103 67.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 8.4e-27 124.0 103 67.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.4e-27 124.0 112 61.6
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.4e-26 123.2 120 60.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.4e-26 123.2 99 69.7
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.9e-26 122.9 104 66.3
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.4e-26 122.5 129 57.4
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.2e-26 122.1 128 57.0
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 4.2e-26 121.7 97 71.1
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 7.1e-26 120.9 115 62.6
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.1e-26 120.9 129 55.8
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.2e-25 120.2 113 59.3
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.6e-25 119.8 119 58.8
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.6e-25 119.8 119 58.8
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.6e-25 119.8 104 64.4
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.6e-25 119.8 130 55.4
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 2.1e-25 119.4 130 54.6
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 2.1e-25 119.4 111 63.1
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.7e-25 119.0 130 56.9
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 3.5e-25 118.6 99 65.7
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 3.5e-25 118.6 129 55.0
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 3.5e-25 118.6 116 57.8
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 3.5e-25 118.6 105 63.8
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 4.6e-25 118.2 116 59.5
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 6.0e-25 117.9 129 54.3
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.0e-25 117.9 135 55.6
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.0e-24 117.1 95 69.5
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 1.3e-24 116.7 97 64.9
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 2.3e-24 115.9 113 63.7
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 3.0e-24 115.5 129 52.7
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.9e-24 115.2 124 57.3
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 5.1e-24 114.8 95 67.4
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 8.7e-24 114.0 119 54.6
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.7e-24 114.0 136 55.1
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.1e-23 113.6 117 58.1
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.5e-23 112.5 136 54.4
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.5e-23 112.5 99 66.7
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 2.5e-23 112.5 95 64.2
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 2.5e-23 112.5 112 60.7
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 4.3e-23 111.7 108 60.2
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 5.6e-23 111.3 103 62.1
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 9.6e-23 110.5 77 83.1
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 9.6e-23 110.5 117 57.3
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.3e-22 110.2 132 52.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.1e-22 109.4 117 54.7
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 3.7e-22 108.6 104 56.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 4.8e-22 108.2 115 56.5
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 4.8e-22 108.2 100 61.0
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 4.8e-22 108.2 116 53.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 4.8e-22 108.2 116 53.4
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.4e-21 106.7 169 46.2
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 3.1e-21 105.5 113 54.9
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 3.4e-20 102.1 133 49.6
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.0e-19 100.5 112 51.8
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.3e-19 100.1 166 42.8
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.9e-19 99.0 115 54.8
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.7e-17 92.4 140 45.0
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 1.1e-15 87.0 105 50.5
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.1e-15 87.0 89 59.6
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.5e-15 86.7 90 56.7
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 7.4e-15 84.3 80 60.0
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 7.4e-15 84.3 98 54.1
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 8.2e-14 80.9 80 57.5
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.4e-13 79.3 74 58.1
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 3.1e-13 79.0 70 61.4
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 5.3e-13 78.2 75 58.7
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 5.3e-13 78.2 70 60.0
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 2.0e-12 76.3 84 57.1
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 4.5e-12 75.1 59 69.5
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 5.9e-12 74.7 69 59.4
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.5e-10 69.3 74 55.4
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 4.2e-10 68.6 93 43.0
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 5.5e-10 68.2 70 55.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.2e-10 67.8 79 45.6
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.1e-09 66.2 86 43.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 3.0e-08 62.4 49 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 3.3e-07 58.9 94 37.2
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 3.3e-07 58.9 42 73.8
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 2.8e-06 55.8 78 46.2
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 6.3e-06 54.7 56 50.0


User provided reference genes

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