Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 1.8e-70 269.2 146 100.0
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 4.0e-46 188.3 145 77.9
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 3.2e-43 178.7 147 70.7
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 7.1e-43 177.6 147 72.8
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 7.1e-43 177.6 147 72.8
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 7.1e-43 177.6 147 72.8
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 2.1e-42 176.0 151 72.8
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 1.0e-41 173.7 148 70.9
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 2.0e-37 159.5 141 70.9
AT1G30515 Arabidopsis thaliana HOM05D012212 ORTHO05D006213 4.6e-34 148.3 141 66.7
Carub.0001s2874 Capsella rubella HOM05D012212 ORTHO05D006213 2.7e-26 122.5 142 56.3
CARHR029930 Cardamine hirsuta HOM05D012212 ORTHO05D006213 4.7e-26 121.7 141 61.0
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 2.0e-21 106.3 132 53.8
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 3.1e-14 82.4 135 45.9
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 5.3e-14 81.6 142 48.6
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 5.3e-14 81.6 123 48.8
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-13 79.7 139 44.6
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.3e-12 77.0 139 43.2
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.3e-12 77.0 120 48.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 6.5e-12 74.7 139 41.7
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.5e-11 71.6 119 47.1
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.5e-11 71.6 147 40.1
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 5.5e-11 71.6 119 45.4
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 5.5e-11 71.6 136 40.4
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 4.0e-09 65.5 109 42.2
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.0e-08 63.2 137 35.8
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 5.7e-08 61.6 152 38.2
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 7.5e-08 61.2 113 45.1
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.3e-07 60.5 133 36.8
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.7e-07 60.1 130 36.2
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 2.2e-07 59.7 125 34.4
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.2e-07 59.7 138 39.9
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.8e-07 59.3 161 34.8
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.8e-07 59.3 118 37.3
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 3.7e-07 58.9 148 33.1
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 6.3e-07 58.2 136 35.3
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.1e-06 57.4 144 32.6
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.1e-06 57.4 144 32.6
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.1e-06 57.4 144 32.6
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.4e-06 57.0 131 37.4
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.8e-06 56.6 144 34.0
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 1.8e-06 56.6 114 42.1
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.8e-06 56.6 133 34.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.8e-06 56.6 129 34.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 7.0e-06 54.7 122 37.7


User provided reference genes

Program Settings