Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.2e-60 236.5 131 100.0
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.0e-56 223.4 130 94.6
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.0e-56 223.4 130 94.6
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 91.6
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 91.6
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.5e-55 218.8 131 91.6
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.3e-55 218.4 131 93.1
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 5.6e-55 217.6 131 91.6
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 9.5e-55 216.9 131 90.8
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 9.5e-55 216.9 131 90.8
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 3.6e-54 214.9 131 90.1
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 90.1
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 90.8
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 89.3
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 5.2e-53 211.1 129 89.9
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.0e-52 209.1 130 90.8
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 86.3
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 85.5
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 2.2e-51 205.7 134 88.8
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 84.0
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.9e-51 205.3 131 84.0
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 84.0
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.7e-51 204.9 130 85.4
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 3.7e-51 204.9 130 85.4
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 4.9e-51 204.5 131 84.0
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 6.4e-51 204.1 131 82.4
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 6.4e-51 204.1 131 84.7
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 6.4e-51 204.1 131 84.7
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 8.4e-51 203.8 129 84.5
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 84.0
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.1e-50 203.4 129 85.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.1e-50 203.4 131 84.7
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.9e-50 202.6 130 83.1
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.9e-50 202.6 126 86.5
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.9e-50 202.6 129 83.7
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 84.0
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 84.0
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.9e-50 202.6 129 84.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 2.4e-50 202.2 129 84.5
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 2.4e-50 202.2 129 84.5
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 2.4e-50 202.2 130 85.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 83.7
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 83.2
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 82.4
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 4.1e-50 201.4 129 83.7
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 84.6
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 84.6
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.4e-50 201.1 130 83.8
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 84.0
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 80.9
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 7.1e-50 200.7 131 80.9
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 9.2e-50 200.3 131 85.5
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 83.2
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 83.2
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 84.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 80.9
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 81.7
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 1.2e-49 199.9 131 80.9
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.6e-49 199.5 130 83.1
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.1e-49 199.1 130 84.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 2.1e-49 199.1 129 82.2
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 2.7e-49 198.7 126 84.9
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 2.7e-49 198.7 125 84.0
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.5e-49 198.4 131 80.9
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 3.5e-49 198.4 126 84.9
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 4.6e-49 198.0 126 84.1
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.7e-48 196.1 126 82.5
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 3.9e-48 194.9 126 83.3
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 3.9e-48 194.9 125 82.4
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 6.6e-48 194.1 130 83.1
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.5e-47 192.2 130 82.3
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 3.3e-47 191.8 130 78.5
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 7.3e-47 190.7 126 80.2
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.2e-46 189.9 139 77.0
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.6e-46 189.5 131 79.4
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 6.2e-46 187.6 136 75.7
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 8.1e-46 187.2 113 88.5
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.4e-45 186.4 119 87.4
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.4e-45 186.4 131 74.8
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.0e-45 184.9 144 73.6
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.2e-44 183.3 113 85.0
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.6e-44 182.2 129 74.4
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 5.8e-44 181.0 111 85.6
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 9.9e-44 180.3 129 73.6
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 6.4e-43 177.6 186 58.1
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 8.4e-43 177.2 113 82.3
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.1e-42 176.8 122 81.1
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.1e-42 176.8 111 86.5
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.1e-42 176.8 126 76.2
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.9e-42 176.0 119 84.0
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.2e-42 174.9 129 73.6
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.1e-42 174.1 121 80.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.2e-41 173.3 106 87.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.0e-41 171.0 121 78.5
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 7.8e-41 170.6 120 72.5
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.7e-40 169.5 116 82.8
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.7e-40 169.5 131 71.8
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 2.3e-40 169.1 111 79.3
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.3e-40 169.1 110 80.0
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 2.3e-40 169.1 104 88.5
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.0e-40 168.7 104 87.5
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.1e-39 166.8 133 74.4
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.1e-39 166.8 129 72.9
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 2.5e-39 165.6 122 76.2
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 5.6e-39 164.5 111 77.5
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 9.6e-39 163.7 117 76.1
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.8e-38 161.4 104 82.7
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 3.1e-37 158.7 107 78.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 3.1e-37 158.7 123 68.3
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 4.0e-37 158.3 131 70.2
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 1.7e-35 152.9 92 87.0
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 1.7e-35 152.9 92 85.9
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 2.2e-35 152.5 131 62.6
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 4.9e-35 151.4 163 55.8
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 4.9e-35 151.4 124 65.3
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 6.4e-35 151.0 92 85.9
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 3.2e-34 148.7 87 90.8
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.2e-34 148.7 120 67.5
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 4.2e-34 148.3 89 85.4
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 4.2e-34 148.3 87 89.7
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 1.2e-33 146.7 117 70.9
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.1e-33 146.0 84 90.5
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.1e-33 146.0 92 83.7
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 2.1e-33 146.0 92 81.5
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.0e-32 143.7 106 68.9
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 1.5e-31 139.8 92 78.3
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.5e-31 139.8 87 87.4
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 3.3e-31 138.7 95 75.8
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 4.3e-31 138.3 88 85.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 7.4e-31 137.5 131 64.9
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.4e-29 132.5 90 77.8
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.4e-28 128.6 95 78.9
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 3.4e-28 128.6 101 71.3
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.4e-26 122.5 92 75.0
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 4.2e-26 121.7 92 75.0
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 9.3e-26 120.6 71 87.3
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 8.7e-24 114.0 88 70.5
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 6.2e-22 107.8 80 76.2
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.1e-21 105.5 61 91.8
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 9.0e-21 104.0 119 50.4
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 7.6e-20 100.9 63 84.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.7e-17 92.4 111 53.2
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 7.9e-17 90.9 125 41.6
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 7.9e-17 90.9 67 68.7
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 2.3e-16 89.4 64 71.9
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 6.7e-16 87.8 66 69.7
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 6.7e-16 87.8 64 70.3
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 8.7e-16 87.4 78 60.3
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 3.3e-15 85.5 65 69.2
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 7.4e-15 84.3 51 88.2
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 3.7e-14 82.0 68 63.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.1e-13 80.5 112 41.1
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 3.0e-08 62.4 123 31.7
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 1.3e-06 57.0 123 34.1


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