Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g25500 Schrenkiella parvula HOM05D013681 ORTHO05D014939 2.6e-162 575.5 319 100.0
C07p16150 Brassica napus HOM05D013681 ORTHO05D014939 7.8e-34 148.7 322 44.1
Thhalv10009291m.g Eutrema salsugineum HOM05D014571 ORTHO05D031424 7.8e-18 95.5 314 32.2
BcaC06g35442 Brassica carinata HOM05D013681 ORTHO05D014939 1.9e-16 90.9 92 56.5
BcaB03g13876 Brassica carinata HOM05D013681 ORTHO05D014939 3.3e-16 90.1 82 63.4
C07p16140 Brassica napus HOM05D013681 ORTHO05D014939 1.6e-15 87.8 92 55.4
BcaB03g13877 Brassica carinata HOM05D001274 ORTHO05D014939 2.3e-14 84.0 311 40.5
BraA07t28851Z Brassica rapa HOM05D013681 ORTHO05D014939 3.1e-14 83.6 266 40.2
BolC7t42107H Brassica oleracea HOM05D013681 ORTHO05D014939 1.3e-12 78.2 282 38.7
BcaC06g35441 Brassica carinata HOM05D013681 ORTHO05D014939 3.7e-12 76.6 227 36.6
BcaB07g32549 Brassica carinata HOM05D014571 ORTHO05D023951 7.1e-11 72.4 350 28.0
BraA07t28848Z Brassica rapa HOM05D013681 ORTHO05D014939 7.1e-11 72.4 95 46.3
BcaC05g26979 Brassica carinata HOM05D014571 ORTHO05D023951 2.7e-10 70.5 210 31.4
A07p10480 Brassica napus HOM05D011432 ORTHO05D017633 5.1e-09 66.2 312 31.4
Thhalv10009455m.g Eutrema salsugineum HOM05D011432 ORTHO05D017633 5.1e-09 66.2 220 30.0
A09p36810 Brassica napus HOM05D014571 ORTHO05D023951 2.5e-08 63.9 317 32.5
A07p10540 Brassica napus HOM05D013681 ORTHO05D014939 9.6e-08 62.0 231 39.4
PSO063G3831 Papaver somniferum HOM05D000568 ORTHO05D003200 2.8e-07 60.5 113 31.0
Lj1A783T51 Lonicera japonica HOM05D000568 ORTHO05D000628 1.8e-06 57.8 119 31.9
FAN16G2270 Fragaria x ananassa HOM05D004211 ORTHO05D005559 3.1e-06 57.0 122 29.5
Sp1g25520 Schrenkiella parvula HOM05D011432 ORTHO05D017633 3.1e-06 57.0 56 46.4
Aa31LG4G17020 Aethionema arabicum HOM05D000568 ORTHO05D003200 4.0e-06 56.6 53 49.1
RcHm_v2.0_Chr5g0022861 Rosa chinensis HOM05D004211 ORTHO05D005559 6.8e-06 55.8 122 28.7
FvH4_3g13640 Fragaria vesca HOM05D004211 ORTHO05D005559 8.9e-06 55.5 122 29.5
FAN11G0244 Fragaria x ananassa HOM05D004211 ORTHO05D005559 8.9e-06 55.5 122 29.5
FAN21G1437 Fragaria x ananassa HOM05D004211 ORTHO05D005559 8.9e-06 55.5 122 29.5
SEGI_15894 Sequoiadendron giganteum HOM05D004211 ORTHO05D005559 8.9e-06 55.5 116 28.4


User provided reference genes

Program Settings