Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g25470 Schrenkiella parvula HOM05D008719 ORTHO05D010898 2.4e-134 482.3 260 100.0
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 9.0e-81 304.3 263 68.8
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 3.9e-76 288.9 263 71.5
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 1.1e-73 280.8 265 68.3
BcaB07g32545 Brassica carinata HOM05D008719 ORTHO05D010898 5.3e-73 278.5 261 68.2
BcaB03g12165 Brassica carinata HOM05D008719 ORTHO05D010898 2.5e-70 269.6 269 69.1
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 5.5e-70 268.5 266 66.2
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 7.4e-67 258.1 265 64.9
BcaC01g00117 Brassica carinata HOM05D008719 ORTHO05D010898 1.7e-66 256.9 261 66.7
A09p36830 Brassica napus HOM05D008719 ORTHO05D010898 6.3e-66 255.0 264 62.9
BraA09t39201Z Brassica rapa HOM05D008719 ORTHO05D010898 6.3e-66 255.0 264 62.9
C03p75980 Brassica napus HOM05D008719 ORTHO05D010898 6.5e-63 245.0 230 68.3
BolC3t19849H Brassica oleracea HOM05D008719 ORTHO05D010898 1.9e-62 243.4 230 67.8
A08p25000 Brassica napus HOM05D008719 ORTHO05D010898 1.2e-61 240.7 274 63.1
BraA08t34455Z Brassica rapa HOM05D008719 ORTHO05D010898 1.2e-61 240.7 274 63.1
BcaB03g13879 Brassica carinata HOM05D008719 ORTHO05D010898 2.8e-58 229.6 233 63.1
C07p16190 Brassica napus HOM05D008719 ORTHO05D010898 1.0e-55 221.1 260 58.5
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 8.8e-52 208.0 265 54.3
BraA07t28855Z Brassica rapa HOM05D008719 ORTHO05D010898 4.8e-50 202.2 285 54.0
C05p28330 Brassica napus HOM05D008719 ORTHO05D010898 8.2e-50 201.4 262 55.0
BcaC05g26977 Brassica carinata HOM05D008719 ORTHO05D010898 1.8e-49 200.3 262 54.6
BolC5t31555H Brassica oleracea HOM05D008719 ORTHO05D010898 1.8e-49 200.3 262 54.6
Carub.0004s1595 Capsella rubella HOM05D008719 ORTHO05D010898 1.2e-48 197.6 266 50.0
AT2G34310 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 3.5e-48 196.1 265 50.9
Aa31LG6G6070 Aethionema arabicum HOM05D008719 ORTHO05D010898 2.9e-47 193.0 348 44.0
A07p10610 Brassica napus HOM05D008719 ORTHO05D010898 6.5e-47 191.8 268 54.9
BolC7t42112H Brassica oleracea HOM05D008719 ORTHO05D010898 7.2e-46 188.3 224 56.7
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 1.6e-45 187.2 264 50.8
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 2.2e-39 166.8 260 46.9
CARHR128380 Cardamine hirsuta HOM05D008719 ORTHO05D010898 1.0e-36 157.9 262 47.3
C04p63660 Brassica napus HOM05D008719 ORTHO05D010898 1.1e-33 147.9 261 46.4
Sp4g16580 Schrenkiella parvula HOM05D008719 ORTHO05D010898 1.8e-33 147.1 264 45.8
BraA04t18131Z Brassica rapa HOM05D008719 ORTHO05D010898 2.7e-32 143.3 261 46.0
A04p26270 Brassica napus HOM05D008719 ORTHO05D010898 1.3e-31 141.0 261 45.2
BolC4t27834H Brassica oleracea HOM05D008719 ORTHO05D010898 8.6e-31 138.3 261 45.6
A05p11350 Brassica napus HOM05D008719 ORTHO05D010898 6.1e-29 132.1 260 43.1
BcaB06g28746 Brassica carinata HOM05D008719 ORTHO05D010898 8.0e-29 131.7 263 44.9
C04p14710 Brassica napus HOM05D008719 ORTHO05D010898 8.3e-26 121.7 264 40.9
THA.LOC104820622 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 1.1e-25 121.3 261 41.0
THA.LOC104814270 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 1.5e-14 84.3 261 34.5
BcaC06g35438 Brassica carinata HOM05D008719 ORTHO05D010898 4.3e-14 82.8 182 43.4
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 1.4e-12 77.8 97 51.5
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 3.9e-07 59.7 339 30.1
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 8.6e-07 58.5 61 50.8
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 1.9e-06 57.4 163 36.8
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 5.6e-06 55.8 328 30.5
THA.LOC104806111 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 7.3e-06 55.5 111 37.8


User provided reference genes

Program Settings