Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 9.2e-76 287.0 161 100.0
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 2.6e-70 268.9 161 93.8
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 4.1e-68 261.5 163 92.6
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.7e-67 258.8 160 93.8
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.7e-67 258.8 160 93.8
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 6.2e-64 247.7 163 90.2
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 8.1e-64 247.3 164 87.2
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 3.1e-63 245.4 162 88.9
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 6.9e-63 244.2 161 90.1
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 1.2e-62 243.4 163 89.0
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.7e-61 239.6 161 86.3
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 3.8e-61 238.4 162 87.0
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 1.1e-60 236.9 162 88.3
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 1.1e-60 236.9 162 88.3
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 2.4e-60 235.7 163 86.5
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 3.2e-60 235.3 162 86.4
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 7.1e-60 234.2 159 87.4
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 7.1e-60 234.2 159 87.4
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 7.1e-60 234.2 159 87.4
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 7.3e-57 224.2 164 84.1
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 3.5e-51 205.3 161 80.1
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 2.0e-46 189.5 164 70.7
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.0e-34 150.6 151 63.6
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.8e-34 149.8 151 62.9
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 5.1e-34 148.3 165 60.6
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 6.7e-34 147.9 138 65.9
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 1.9e-33 146.4 145 69.0
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.9e-33 146.4 163 60.7
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 2.5e-33 146.0 162 62.3
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 2.5e-33 146.0 162 62.3
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 3.3e-33 145.6 155 61.3
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 3.3e-33 145.6 161 62.1
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 4.3e-33 145.2 154 61.0
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.2e-32 142.9 143 63.6
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 2.8e-32 142.5 160 62.5
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 6.3e-32 141.4 153 64.7
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 6.3e-32 141.4 144 63.2
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 8.2e-32 141.0 146 65.8
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 8.2e-32 141.0 157 62.4
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 8.2e-32 141.0 144 63.2
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.4e-31 140.2 138 67.4
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.8e-31 139.8 159 61.0
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 2.4e-31 139.4 153 63.4
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 2.4e-31 139.4 133 64.7
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 6.9e-31 137.9 139 62.6
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 1.2e-30 137.1 163 59.5
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 1.5e-30 136.7 140 64.3
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 2.6e-30 136.0 158 61.4
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 3.4e-30 135.6 137 65.0
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 3.4e-30 135.6 153 62.1
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 5.9e-30 134.8 163 57.7
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 7.6e-30 134.4 159 60.4
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 7.6e-30 134.4 136 66.2
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.0e-29 134.0 156 58.3
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.3e-29 133.7 169 59.8
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.3e-29 133.7 142 63.4
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.7e-29 133.3 159 58.5
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.7e-29 133.3 144 65.3
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 2.2e-29 132.9 141 61.0
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 2.2e-29 132.9 156 57.7
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.2e-29 132.9 156 57.7
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.2e-29 132.9 143 63.6
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 3.8e-29 132.1 140 62.1
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 3.8e-29 132.1 155 58.7
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 6.5e-29 131.3 169 60.4
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 1.9e-28 129.8 138 61.6
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 2.5e-28 129.4 132 62.9
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 3.2e-28 129.0 154 55.8
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 5.5e-28 128.3 161 55.9
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 7.2e-28 127.9 153 60.1
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 7.2e-28 127.9 141 60.3
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 7.2e-28 127.9 109 71.6
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 9.3e-28 127.5 156 57.7
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 1.2e-27 127.1 162 58.0
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.2e-27 127.1 156 56.4
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 1.2e-27 127.1 138 60.1
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.6e-27 126.7 132 63.6
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 2.7e-27 125.9 133 61.7
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 3.6e-27 125.6 147 60.5
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 4.6e-27 125.2 200 50.0
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 7.9e-27 124.4 131 62.6
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 1.0e-26 124.0 138 62.3
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 6.7e-26 121.3 159 58.5
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 8.8e-26 120.9 134 61.2
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 2.5e-25 119.4 162 53.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 4.3e-25 118.6 162 52.5
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 1.7e-24 116.7 136 61.0
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 4.8e-24 115.2 134 61.9
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 6.3e-24 114.8 76 81.6
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.3e-24 114.8 133 60.2
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 6.3e-24 114.8 133 60.2
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 8.2e-24 114.4 169 52.7
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 1.8e-23 113.2 108 66.7
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 3.1e-23 112.5 165 53.3
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 4.1e-23 112.1 160 51.9
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 5.3e-23 111.7 158 52.5
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 6.9e-23 111.3 161 54.7
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 6.9e-23 111.3 137 60.6
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 3.4e-22 109.0 139 59.0
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 7.7e-22 107.8 144 52.1
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 1.0e-21 107.5 72 79.2
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.3e-21 107.1 116 63.8
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 2.9e-21 105.9 161 52.2
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 6.5e-21 104.8 123 62.6
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 3.2e-20 102.4 87 67.8
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 7.2e-20 101.3 133 55.6
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 9.4e-20 100.9 141 52.5
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 9.4e-20 100.9 165 51.5
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.2e-19 100.5 136 56.6
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 4.7e-19 98.6 59 89.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 4.7e-19 98.6 77 71.4
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 6.1e-19 98.2 66 81.8
BolC7t42159H Brassica oleracea HOM05D003540 ORTHO05D004012 1.0e-18 97.4 75 84.0
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 3.9e-18 95.5 94 63.8
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 5.1e-18 95.1 142 52.1
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.5e-17 93.6 142 50.0
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 2.8e-16 89.4 99 62.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 2.8e-16 89.4 99 62.6
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 6.3e-16 88.2 168 42.9
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 3.1e-15 85.9 118 55.9
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 4.1e-15 85.5 162 43.8
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.9e-12 76.6 128 52.3
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 3.2e-12 75.9 122 50.0
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.2e-11 73.9 65 63.1
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 8.0e-11 71.2 70 60.0
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 6.7e-10 68.2 138 47.8
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 1.1e-09 67.4 124 48.4
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 7.4e-09 64.7 136 47.1


User provided reference genes

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