Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 2.4e-105 385.6 199 100.0
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 4.2e-86 321.6 199 85.4
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 4.9e-79 298.1 200 81.5
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 9.3e-78 293.9 200 81.0
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 2.7e-77 292.4 200 81.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 6.0e-77 291.2 200 79.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.0e-76 290.4 201 80.6
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 8.2e-74 280.8 200 79.5
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 8.2e-74 280.8 200 79.5
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 5.5e-70 268.1 138 97.1
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.2e-69 266.9 212 70.8
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 1.8e-68 263.1 138 94.9
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.8e-68 263.1 138 94.2
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.4e-62 243.4 166 78.3
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.4e-60 236.9 202 66.3
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.9e-60 235.3 170 70.0
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 8.8e-60 234.2 202 65.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 4.4e-59 231.9 197 64.0
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 5.7e-59 231.5 190 66.3
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 5.7e-59 231.5 127 87.4
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 7.4e-59 231.1 196 63.3
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 7.4e-59 231.1 127 88.2
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.7e-59 230.7 149 77.2
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 9.7e-59 230.7 187 65.8
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.3e-58 230.3 168 71.4
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.7e-58 229.9 151 76.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.7e-58 229.9 200 64.0
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.2e-58 229.6 127 87.4
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.8e-58 229.2 205 62.9
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.8e-58 229.2 164 71.3
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 2.8e-58 229.2 170 70.0
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 3.7e-58 228.8 173 70.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.7e-58 228.8 171 70.2
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 6.3e-58 228.0 149 76.5
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 8.2e-58 227.6 165 70.9
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.1e-57 227.3 180 68.9
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 1.4e-57 226.9 182 65.9
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.8e-57 226.5 200 60.5
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.8e-57 226.5 144 77.8
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 2.4e-57 226.1 156 73.1
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 3.1e-57 225.7 122 90.2
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.1e-57 225.7 152 75.0
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.1e-57 225.3 164 68.3
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 4.1e-57 225.3 178 70.8
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 4.1e-57 225.3 166 71.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 5.3e-57 224.9 143 76.9
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 5.3e-57 224.9 152 75.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 5.3e-57 224.9 177 65.0
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 6.9e-57 224.6 139 79.1
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 9.1e-57 224.2 151 74.2
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.2e-56 223.8 159 71.7
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.2e-56 223.8 152 73.0
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 200 63.0
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.2e-56 223.8 179 66.5
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.5e-56 223.4 151 74.2
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.5e-56 223.4 165 70.3
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.6e-56 222.6 139 78.4
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.6e-56 222.6 122 86.1
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 2.6e-56 222.6 162 69.1
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.6e-56 222.6 156 71.8
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 2.6e-56 222.6 158 70.9
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.6e-56 222.6 139 77.7
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 3.4e-56 222.2 196 62.8
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 153 71.2
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 4.5e-56 221.9 151 74.2
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 4.5e-56 221.9 130 82.3
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 7.7e-56 221.1 138 79.0
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.0e-55 220.7 154 72.7
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 1.0e-55 220.7 144 75.0
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.2e-55 219.5 152 71.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 2.9e-55 219.2 147 74.1
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.9e-55 219.2 185 63.8
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.0e-55 218.4 122 85.2
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 6.5e-55 218.0 154 69.5
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 6.5e-55 218.0 158 69.6
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.4e-54 216.9 123 82.9
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.9e-54 216.5 177 63.8
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 2.5e-54 216.1 146 72.6
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 3.2e-54 215.7 122 84.4
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 5.5e-54 214.9 199 60.3
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 7.2e-54 214.5 144 75.0
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.6e-53 213.4 150 71.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 1.6e-53 213.4 117 87.2
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 3.6e-53 212.2 125 80.8
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 6.1e-53 211.5 164 64.0
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 7.9e-53 211.1 195 59.5
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.0e-52 210.7 188 62.2
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.3e-52 209.5 159 71.1
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.1e-51 207.2 168 64.9
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.0e-51 206.5 138 69.6
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 6.3e-50 201.4 151 67.5
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.4e-49 199.5 194 55.2
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.1e-49 199.1 124 75.0
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 4.1e-49 198.7 190 56.8
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 1.2e-48 197.2 148 67.6
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.2e-45 187.2 134 66.4
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.2e-43 180.6 188 54.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 5.7e-43 178.3 99 85.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 5.7e-43 178.3 122 65.6
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.2e-42 176.4 122 67.2
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.7e-40 169.5 122 63.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 3.5e-40 169.1 122 63.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 7.7e-40 167.9 122 63.1
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 1.5e-38 163.7 106 71.7
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 4.0e-36 155.6 124 70.2
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.1e-33 147.5 186 48.9
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.4e-33 147.1 117 65.0
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 5.0e-31 138.7 147 53.7
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.8e-28 130.2 101 68.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 2.2e-26 123.2 121 51.2
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 5.4e-25 118.6 130 51.5
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 8.0e-21 104.8 126 43.7
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.7e-18 97.1 71 64.8
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.0e-16 90.1 150 42.0
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-15 87.8 69 62.3
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.0e-15 87.8 69 62.3
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.9e-15 85.9 45 86.7
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.8e-13 79.7 55 69.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.7e-13 79.0 55 70.9
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.3e-12 76.6 114 41.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 4.4e-11 72.4 37 86.5
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.0e-07 59.7 42 57.1


User provided reference genes

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