Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.2e-55 219.5 108 100.0
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.4e-48 195.3 112 88.4
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.2e-48 194.5 112 88.4
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.7e-47 191.8 112 89.3
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 3.0e-46 188.3 107 88.8
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 5.6e-45 184.1 112 86.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 2.1e-44 182.2 113 85.8
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 2.1e-44 182.2 116 82.8
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 6.9e-43 177.2 106 84.9
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-42 176.4 104 86.5
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 3.4e-42 174.9 109 85.3
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 8.4e-41 170.2 115 80.0
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.4e-40 169.5 107 80.4
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.0e-38 163.3 109 80.7
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.8e-36 155.2 100 80.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 5.5e-32 141.0 85 83.5
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 9.3e-32 140.2 103 68.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 9.7e-29 130.2 100 65.0
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.6e-26 122.1 102 60.8
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.6e-26 122.1 110 56.4
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 3.4e-26 121.7 113 59.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 3.4e-26 121.7 87 65.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.5e-26 121.3 99 60.6
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 4.5e-26 121.3 99 61.6
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.0e-25 120.2 108 57.4
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.3e-25 119.8 101 60.4
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.2e-25 119.0 89 65.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.9e-25 118.6 94 61.7
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 3.8e-25 118.2 91 63.7
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 3.8e-25 118.2 91 63.7
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.0e-25 117.9 98 62.2
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 5.0e-25 117.9 86 66.3
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 6.5e-25 117.5 98 58.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 8.5e-25 117.1 108 56.5
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 1.1e-24 116.7 93 61.3
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.4e-24 116.3 98 59.2
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 1.4e-24 116.3 102 56.9
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.5e-24 115.5 87 65.5
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 4.2e-24 114.8 108 55.6
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 5.5e-24 114.4 99 54.5
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 5.5e-24 114.4 100 57.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 5.5e-24 114.4 74 70.3
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 5.5e-24 114.4 106 58.5
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 5.5e-24 114.4 114 50.9
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 7.2e-24 114.0 67 74.6
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 7.2e-24 114.0 99 56.6
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 7.2e-24 114.0 91 62.6
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 9.4e-24 113.6 93 57.0
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.2e-23 113.2 71 70.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.2e-23 113.2 108 53.7
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 1.2e-23 113.2 93 63.4
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.6e-23 112.8 94 59.6
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.6e-23 112.8 85 58.8
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 2.1e-23 112.5 77 66.2
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.1e-23 112.5 104 53.8
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 2.7e-23 112.1 80 68.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.7e-23 112.1 81 67.9
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.7e-23 112.1 93 60.2
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 3.6e-23 111.7 97 58.8
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 4.7e-23 111.3 97 54.6
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 7.9e-23 110.5 57 82.5
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 7.9e-23 110.5 59 78.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.0e-22 110.2 94 57.4
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.4e-22 109.8 91 60.4
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 1.4e-22 109.8 91 61.5
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.4e-22 109.8 98 57.1
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 1.4e-22 109.8 66 72.7
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.8e-22 109.4 68 72.1
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.8e-22 109.4 68 72.1
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.3e-22 109.0 59 78.0
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.0e-22 108.6 93 61.3
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 3.9e-22 108.2 89 58.4
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 5.1e-22 107.8 88 58.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 6.7e-22 107.5 99 56.6
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 6.7e-22 107.5 73 65.8
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 6.7e-22 107.5 104 54.8
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 8.8e-22 107.1 68 67.6
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.1e-21 106.7 64 71.9
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.5e-21 106.3 96 58.3
BcaC06g35377 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-21 105.9 112 58.9
BcaNung06837 Brassica carinata HOM05D007416 ORTHO05D009329 2.0e-21 105.9 112 58.9
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.6e-21 105.5 94 54.3
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 4.4e-21 104.8 104 53.8
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 5.7e-21 104.4 68 69.1
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 5.7e-21 104.4 94 55.3
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 5.7e-21 104.4 99 51.5
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.3e-20 103.2 104 52.9
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.7e-20 102.8 97 54.6
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 1.7e-20 102.8 97 54.6
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.7e-20 102.8 72 63.9
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.7e-20 102.8 72 63.9
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 2.2e-20 102.4 66 66.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.2e-20 102.4 98 53.1
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.8e-20 102.1 87 55.2
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 3.7e-20 101.7 101 52.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 4.8e-20 101.3 107 50.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 8.2e-20 100.5 118 46.6
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.4e-19 99.8 98 51.0
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.1e-19 98.6 106 45.3
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 5.3e-19 97.8 102 50.0
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.4e-16 89.7 70 57.1
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 9.4e-16 87.0 92 48.9
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.6e-15 86.3 54 66.7
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 3.9e-14 81.6 90 44.4
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 5.3e-11 71.2 72 48.6
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 8.8e-06 53.9 41 56.1


User provided reference genes

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