Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 0.0e+00 1209.1 616 100.0
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.3e-311 1072.4 620 89.0
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 1.7e-311 1072.0 618 89.2
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 4.6e-309 1063.9 617 88.5
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 7.9e-309 1063.1 616 89.1
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 2.3e-308 1061.6 621 87.9
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 3.0e-308 1061.2 618 88.3
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 3.9e-308 1060.8 617 89.1
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.9e-307 1058.5 621 87.9
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 7.3e-307 1056.6 623 87.6
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 4.0e-305 1050.8 615 88.5
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 6.9e-305 1050.0 622 87.1
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.4e-268 929.5 708 70.8
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 2.0e-248 862.4 614 72.6
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 2.4e-188 662.9 609 56.2
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 2.9e-186 656.0 597 56.8
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 1.4e-185 653.7 609 55.7
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 3.2e-185 652.5 602 54.8
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 9.3e-185 651.0 613 54.6
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 6.0e-184 648.3 610 55.6
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 2.3e-183 646.4 608 55.6
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.3e-181 640.6 619 54.4
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 4.8e-181 638.6 560 57.9
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 1.4e-180 637.1 600 54.5
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 9.0e-180 634.4 572 55.6
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.4e-177 627.1 568 55.8
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 1.2e-176 624.0 595 53.3
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.1e-176 623.2 598 53.3
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.0e-175 620.9 600 54.3
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 3.3e-174 615.9 616 52.1
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 3.3e-174 615.9 589 53.8
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.1e-172 609.4 557 56.7
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 4.1e-172 609.0 600 53.5
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 3.4e-171 605.9 601 52.9
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 8.5e-170 601.3 616 52.9
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 1.1e-169 600.9 602 51.7
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.9e-169 600.1 608 53.1
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 7.2e-169 598.2 617 51.9
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 6.1e-168 595.1 621 51.2
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 6.1e-168 595.1 601 52.6
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 7.9e-168 594.7 610 53.1
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.5e-166 590.5 610 52.5
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 7.4e-166 588.2 611 50.9
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 7.4e-166 588.2 572 51.7
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.3e-165 587.4 586 52.9
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 8.2e-165 584.7 605 50.9
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 7.7e-163 578.2 604 51.0
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.0e-162 577.8 603 51.9
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.5e-161 573.2 604 51.7
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 6.1e-160 568.5 606 49.5
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 2.3e-159 566.6 627 48.3
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.9e-159 565.8 586 51.5
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 3.3e-158 562.8 619 49.9
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 7.4e-158 561.6 618 51.5
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 6.3e-157 558.5 645 47.4
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 3.1e-156 556.2 609 48.4
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 5.9e-155 552.0 587 50.8
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.0e-154 551.2 629 49.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 1.1e-153 547.7 578 50.0
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 7.2e-153 545.0 569 49.2
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 3.9e-151 539.3 569 48.7
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 8.8e-151 538.1 580 49.1
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 2.0e-150 537.0 609 46.8
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 2.2e-149 533.5 627 47.5
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.2e-149 533.5 575 48.7
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 8.2e-149 531.6 532 51.3
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 1.1e-148 531.2 608 47.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 1.2e-147 527.7 624 45.7
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 7.7e-147 525.0 603 48.6
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 3.8e-146 522.7 605 45.8
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 3.2e-145 519.6 618 46.9
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 1.4e-143 514.2 669 43.6
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.3e-141 507.7 669 42.8
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 1.3e-138 497.7 451 54.3
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 2.6e-134 483.4 596 46.3
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 1.8e-132 477.2 446 57.4
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 3.8e-130 469.5 570 46.0
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 8.0e-128 461.8 419 52.5
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.0e-123 447.2 419 53.7
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 8.6e-122 441.8 420 56.0
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 4.3e-121 439.5 457 49.2
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.6e-120 437.6 579 43.5
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 4.7e-120 436.0 461 50.8
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 6.1e-120 435.6 593 40.6
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 6.8e-119 432.2 600 42.7
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.7e-117 427.6 523 42.8
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 1.1e-113 414.8 595 40.3
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 3.3e-113 413.3 581 42.3
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 4.7e-112 409.5 426 49.3
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 5.8e-110 402.5 613 40.6
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 9.2e-108 395.2 386 50.8
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 3.0e-106 390.2 434 48.4
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 1.1e-105 388.3 407 50.4
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 9.5e-105 385.2 389 50.9
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 1.6e-104 384.4 610 39.3
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 1.1e-103 381.7 497 40.6
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 3.9e-98 363.2 419 45.8
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.4e-95 354.8 491 43.0
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 3.1e-87 327.0 583 34.8
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.1e-84 318.5 615 33.0
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 4.6e-83 313.2 580 35.5
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 6.0e-67 259.6 314 45.2
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 1.1e-57 228.8 591 28.6
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 9.3e-52 209.1 233 46.4
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.9e-49 201.4 215 51.2
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 4.2e-44 183.7 619 27.6
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 7.9e-43 179.5 198 49.5
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 6.9e-39 166.4 265 38.5
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 6.3e-32 143.3 226 39.8
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 1.3e-29 135.6 308 33.4
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 7.2e-28 129.8 93 76.3
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 8.8e-26 122.9 206 33.0
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 2.0e-25 121.7 157 44.6
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 2.6e-17 94.7 131 48.9
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 7.5e-17 93.2 316 27.5
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 7.0e-15 86.7 175 36.0
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 4.5e-14 84.0 65 66.2
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 3.3e-12 77.8 76 51.3
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 4.7e-11 73.9 67 58.2
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 2.4e-07 61.6 47 59.6
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 1.6e-06 58.9 68 41.2
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.6e-06 58.9 68 41.2


User provided reference genes

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