Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 1.2e-149 533.1 272 100.0
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 3.2e-113 412.1 258 81.4
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 1.4e-105 386.7 260 78.8
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 2.3e-103 379.4 261 78.2
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 1.3e-101 373.6 260 77.7
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 4.2e-97 358.6 260 73.5
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 2.2e-85 319.7 261 71.3
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 8.5e-82 307.8 293 63.5
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 2.5e-81 306.2 276 66.3
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 2.2e-74 283.1 260 64.2
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 1.5e-73 280.4 260 65.0
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 9.5e-65 251.1 253 54.2
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 2.1e-56 223.4 259 48.6
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 1.4e-55 220.7 264 45.8
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 1.2e-54 217.6 247 48.6
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 3.4e-54 216.1 264 47.0
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 5.8e-54 215.3 269 48.0
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 9.8e-54 214.5 263 46.4
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 2.3e-50 203.4 259 43.2
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 1.9e-49 200.3 261 44.4
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 4.3e-49 199.1 225 47.6
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 6.8e-47 191.8 252 43.7
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.5e-46 190.7 224 46.9
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 4.4e-46 189.1 274 42.0
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 3.2e-44 183.0 225 45.3
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 7.1e-44 181.8 236 43.2
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 2.7e-43 179.9 269 40.9
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 2.5e-41 173.3 266 41.7
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 7.3e-41 171.8 237 38.0
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 1.6e-40 170.6 199 45.2
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.6e-40 170.6 225 44.0
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 1.4e-39 167.5 246 41.1
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 5.2e-39 165.6 251 39.0
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 2.0e-38 163.7 234 41.5
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 3.4e-38 162.9 260 41.2
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 4.4e-38 162.5 265 37.7
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 9.9e-38 161.4 264 36.7
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 7.1e-36 155.2 265 37.4
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 7.1e-36 155.2 267 37.1
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.6e-35 154.1 211 42.7
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 2.1e-35 153.7 266 34.6
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 2.1e-35 153.7 266 34.6
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 3.5e-35 152.9 225 37.8
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 4.6e-35 152.5 264 37.9
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 7.8e-35 151.8 262 38.5
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 7.8e-35 151.8 286 34.3
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 1.0e-34 151.4 263 36.5
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 2.3e-34 150.2 227 38.8
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 3.0e-34 149.8 228 38.6
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 5.1e-34 149.1 264 34.1
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 6.6e-34 148.7 258 37.6
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 6.6e-34 148.7 225 36.9
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 8.6e-34 148.3 275 33.8
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 3.3e-33 146.4 257 35.0
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 7.3e-33 145.2 239 38.5
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 2.1e-32 143.7 267 37.8
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 2.1e-32 143.7 267 37.8
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 3.6e-32 142.9 264 35.2
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 8.1e-32 141.7 183 45.9
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 1.1e-31 141.4 273 35.9
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 1.4e-31 141.0 255 38.0
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 6.9e-31 138.7 247 35.6
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 1.3e-29 134.4 248 35.9
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 2.2e-29 133.7 169 43.8
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 2.9e-29 133.3 258 34.1
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 2.9e-29 133.3 227 36.6
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 6.4e-29 132.1 163 46.0
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 1.1e-28 131.3 266 35.0
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 1.4e-28 131.0 242 33.5
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 2.4e-28 130.2 244 34.0
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 3.2e-28 129.8 233 36.5
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 1.2e-27 127.9 212 37.7
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 2.1e-27 127.1 168 43.5
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 2.7e-27 126.7 275 34.9
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 7.8e-27 125.2 158 44.3
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 2.3e-26 123.6 168 41.1
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 6.6e-26 122.1 281 32.0
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 1.5e-25 120.9 273 33.7
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 2.1e-24 117.1 251 33.5
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 4.8e-24 115.9 266 32.7
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 2.0e-22 110.5 297 29.6
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 5.8e-22 109.0 230 33.5
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 5.8e-22 109.0 225 32.4
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 1.3e-21 107.8 227 33.5
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 5.4e-20 102.4 248 29.8
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 1.6e-19 100.9 165 35.8
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 3.5e-19 99.8 148 38.5
C02p14100 Brassica napus HOM05D007447 ORTHO05D009372 7.9e-19 98.6 61 73.8
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 2.3e-18 97.1 248 31.0
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 2.3e-18 97.1 248 31.0
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 1.5e-17 94.4 208 30.8
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 1.2e-14 84.7 189 29.6
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 1.3e-13 81.3 144 33.3
A03p65270 Brassica napus HOM05D007447 ORTHO05D009372 4.9e-13 79.3 72 55.6
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 3.5e-11 73.2 92 40.2
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 7.9e-11 72.0 204 27.5
Carub.0008s0592 Capsella rubella HOM05D007447 ORTHO05D009372 3.0e-10 70.1 49 73.5
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 3.9e-10 69.7 143 29.4
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 8.7e-10 68.6 133 32.3
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 1.1e-09 68.2 297 24.9
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.8e-07 60.8 70 42.9
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.8e-07 60.8 70 42.9
AUR62031072 Chenopodium quinoa HOM05D007447 ORTHO05D009372 5.3e-07 59.3 208 24.0
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.5e-06 57.8 69 40.6


User provided reference genes

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