Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 2.7e-39 164.9 82 100.0
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.6e-36 155.6 82 93.9
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 9.9e-34 146.4 82 86.6
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 4.2e-32 141.0 75 90.7
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 4.2e-32 141.0 79 87.3
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 5.4e-32 140.6 79 88.6
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 5.4e-32 140.6 79 88.6
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 9.3e-32 139.8 74 91.9
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 9.3e-32 139.8 77 89.6
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 9.3e-32 139.8 77 89.6
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.2e-31 139.4 80 83.8
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 2.3e-30 135.2 77 88.3
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 8.7e-30 133.3 79 84.8
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 7.3e-29 130.2 75 86.7
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 1.6e-28 129.0 75 86.7
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 1.6e-28 129.0 75 86.7
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 1.6e-28 129.0 75 86.7
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-28 128.3 75 85.3
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 2.0e-26 122.1 79 79.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.3e-25 119.4 65 89.2
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 9.3e-24 113.2 68 82.4
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 2.7e-23 111.7 57 93.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 6.0e-23 110.5 57 93.0
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.0e-22 109.8 68 76.5
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.0e-22 109.8 67 79.1
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.0e-22 109.8 67 79.1
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.0e-22 109.8 67 79.1
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.0e-22 109.8 67 79.1
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 3.9e-22 107.8 55 92.7
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 3.9e-22 107.8 57 93.0
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.9e-22 107.8 68 75.0
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 5.1e-22 107.5 72 72.2
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 5.1e-22 107.5 62 82.3
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 6.7e-22 107.1 52 98.1
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 6.7e-22 107.1 52 98.1
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 8.7e-22 106.7 64 81.2
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 8.7e-22 106.7 75 74.7
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 1.1e-21 106.3 67 77.6
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 1.5e-21 105.9 77 71.4
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 1.5e-21 105.9 52 96.2
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 1.5e-21 105.9 79 69.6
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.5e-21 105.9 62 82.3
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 1.9e-21 105.5 57 89.5
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.9e-21 105.5 63 82.5
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.9e-21 105.5 63 82.5
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.9e-21 105.5 63 82.5
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 2.5e-21 105.1 77 68.8
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 3.3e-21 104.8 60 83.3
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 3.3e-21 104.8 72 72.2
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 3.3e-21 104.8 79 69.6
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 4.3e-21 104.4 63 81.0
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 4.3e-21 104.4 77 68.8
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 4.3e-21 104.4 80 68.8
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 5.6e-21 104.0 62 80.6
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 5.6e-21 104.0 64 81.2
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 7.4e-21 103.6 77 66.2
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 9.6e-21 103.2 52 94.2
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 9.6e-21 103.2 64 78.1
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 9.6e-21 103.2 77 70.1
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 9.6e-21 103.2 60 81.7
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 1.3e-20 102.8 65 80.0
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.6e-20 102.4 72 72.2
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 1.6e-20 102.4 57 89.5
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 2.1e-20 102.1 75 70.7
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 2.1e-20 102.1 53 88.7
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 2.1e-20 102.1 52 92.3
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 2.1e-20 102.1 53 88.7
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 2.8e-20 101.7 61 78.7
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 2.8e-20 101.7 65 75.4
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 2.8e-20 101.7 64 78.1
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 3.7e-20 101.3 60 81.7
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 3.7e-20 101.3 77 68.8
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 8.1e-20 100.1 55 83.6
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 8.1e-20 100.1 51 92.2
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 8.1e-20 100.1 82 63.4
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.4e-19 99.4 59 79.7
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 1.4e-19 99.4 62 74.2
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 3.1e-19 98.2 62 77.4
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 4.0e-19 97.8 52 90.4
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 5.3e-19 97.4 76 67.1
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 6.9e-19 97.1 53 83.0
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 6.9e-19 97.1 77 63.6
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 6.9e-19 97.1 73 69.9
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 2.6e-18 95.1 63 73.0
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 4.5e-18 94.4 47 93.6
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.5e-18 94.4 63 73.0
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 7.6e-18 93.6 47 91.5
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 7.6e-18 93.6 52 86.5
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 7.6e-18 93.6 67 68.7
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 1.0e-17 93.2 71 62.0
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 2.9e-17 91.7 63 69.8
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.1e-16 89.7 47 89.4
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.1e-16 89.7 97 53.6
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.9e-16 89.0 46 91.3
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 4.2e-16 87.8 52 82.7
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 4.2e-16 87.8 49 83.7
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 5.5e-16 87.4 47 85.1
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 5.5e-16 87.4 65 72.3
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 5.5e-16 87.4 51 84.3
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 9.3e-16 86.7 60 71.7
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.7e-15 85.1 42 95.2
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 2.7e-15 85.1 60 73.3
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 6.0e-15 84.0 73 60.3
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 1.8e-14 82.4 44 84.1
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 5.1e-14 80.9 53 79.2
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 7.4e-13 77.0 49 77.6
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.1e-12 75.5 49 75.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 9.0e-11 70.1 37 89.2
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.8e-10 67.4 43 72.1
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 1.0e-09 66.6 57 59.6
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.8e-09 64.7 38 76.3
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.8e-09 64.7 38 76.3
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 1.4e-08 62.8 28 96.4
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 3.0e-06 55.1 59 54.2
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 6.7e-06 53.9 50 56.0


User provided reference genes

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