Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 3.9e-57 224.6 112 100.0
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 2.0e-32 142.5 87 80.5
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 2.0e-29 132.5 87 78.2
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 2.2e-28 129.0 87 77.0
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 6.5e-28 127.5 87 75.9
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 1.9e-27 125.9 87 75.9
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 1.9e-27 125.9 87 75.9
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 2.5e-27 125.6 87 74.7
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 2.0e-24 115.9 88 71.6
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 9.7e-24 113.6 87 69.0
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 2.2e-23 112.5 66 83.3
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 2.9e-20 102.1 78 70.5
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 2.1e-18 95.9 79 64.6
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 4.7e-18 94.7 81 61.7
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 6.1e-18 94.4 74 66.2
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 8.0e-18 94.0 64 73.4
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 8.0e-18 94.0 88 55.7
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 8.0e-18 94.0 88 55.7
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 8.0e-18 94.0 88 55.7
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 3.0e-17 92.0 65 72.3
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 3.0e-17 92.0 65 72.3
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 3.0e-17 92.0 65 72.3
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 3.0e-17 92.0 65 72.3
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 3.0e-17 92.0 65 72.3
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 2.6e-16 89.0 81 64.2
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 5.7e-16 87.8 77 59.7
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 7.5e-16 87.4 59 67.8
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 1.3e-15 86.7 79 58.2
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 1.3e-15 86.7 61 65.6
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 2.8e-15 85.5 70 62.9
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 6.3e-15 84.3 60 70.0
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 6.3e-15 84.3 76 55.3
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 1.8e-14 82.8 68 60.3
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 4.1e-14 81.6 69 56.5
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 5.3e-14 81.3 55 72.7
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 5.3e-14 81.3 86 50.0
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 7.0e-14 80.9 48 75.0
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 9.1e-14 80.5 60 65.0
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 1.6e-13 79.7 58 67.2
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.0e-13 79.3 46 82.6
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 3.5e-13 78.6 58 67.2
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 3.5e-13 78.6 68 58.8
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 4.5e-13 78.2 68 54.4
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 5.9e-13 77.8 63 61.9
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 5.9e-13 77.8 51 70.6
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 1.0e-12 77.0 51 70.6
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 1.3e-12 76.6 53 67.9
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 1.3e-12 76.6 48 70.8
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 1.3e-12 76.6 58 60.3
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 1.7e-12 76.3 68 60.3
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 1.7e-12 76.3 78 60.3
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 1.7e-12 76.3 55 67.3
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 1.7e-12 76.3 79 54.4
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 2.2e-12 75.9 53 71.7
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 2.2e-12 75.9 60 66.7
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.9e-12 75.5 55 61.8
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 3.8e-12 75.1 41 82.9
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 5.0e-12 74.7 45 75.6
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 8.5e-12 73.9 68 58.8
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 8.5e-12 73.9 67 55.2
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 8.5e-12 73.9 75 50.7
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 1.5e-11 73.2 50 70.0
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 1.5e-11 73.2 56 57.1
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 3.2e-11 72.0 57 64.9
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 4.2e-11 71.6 48 66.7
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 7.2e-11 70.9 65 53.8
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 7.2e-11 70.9 60 60.0
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 9.4e-11 70.5 46 69.6
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 9.4e-11 70.5 95 46.3
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 9.4e-11 70.5 81 49.4
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 9.4e-11 70.5 55 65.5
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 1.2e-10 70.1 51 68.6
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 1.2e-10 70.1 52 65.4
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 1.6e-10 69.7 82 46.3
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 1.6e-10 69.7 43 72.1
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 2.1e-10 69.3 43 69.8
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 2.1e-10 69.3 59 61.0
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 2.7e-10 68.9 48 72.9
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 2.7e-10 68.9 48 72.9
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 2.7e-10 68.9 47 61.7
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 2.7e-10 68.9 60 58.3
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 3.6e-10 68.6 59 59.3
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 3.6e-10 68.6 40 77.5
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 4.7e-10 68.2 57 54.4
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.4e-09 66.6 72 54.2
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 3.0e-09 65.5 56 53.6
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 4.0e-09 65.1 60 56.7
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 5.2e-09 64.7 67 58.2
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 5.2e-09 64.7 89 42.7
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 6.8e-09 64.3 61 57.4
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 8.8e-09 63.9 46 69.6
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 8.8e-09 63.9 44 75.0
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 1.5e-08 63.2 63 57.1
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 2.0e-08 62.8 46 67.4
PSO063G6114 Papaver somniferum HOM05D007247 ORTHO05D009208 3.4e-08 62.0 66 53.0
PSO754G0004 Papaver somniferum HOM05D007247 ORTHO05D009208 4.4e-08 61.6 66 53.0
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 4.4e-08 61.6 48 60.4
FvH4_4g25640 Fragaria vesca HOM05D007247 ORTHO05D009208 5.7e-08 61.2 49 57.1
FAN07G0181 Fragaria x ananassa HOM05D007247 ORTHO05D009208 5.7e-08 61.2 49 57.1
FAN17G2797 Fragaria x ananassa HOM05D007247 ORTHO05D009208 5.7e-08 61.2 49 57.1
FAN22G0007 Fragaria x ananassa HOM05D007247 ORTHO05D009208 5.7e-08 61.2 49 57.1
FAN22G1782 Fragaria x ananassa HOM05D007247 ORTHO05D009208 5.7e-08 61.2 49 57.1
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 7.5e-08 60.8 54 55.6
FAN12G2765 Fragaria x ananassa HOM05D007247 ORTHO05D009208 9.8e-08 60.5 49 57.1
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 1.3e-07 60.1 50 58.0
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 3.7e-07 58.5 41 61.0
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.1e-06 57.0 41 58.5
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 4.1e-06 55.1 42 57.1
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 5.4e-06 54.7 49 63.3
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 5.4e-06 54.7 54 48.1


User provided reference genes

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