Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g22780 Schrenkiella parvula HOM05D010181 ORTHO05D012280 2.9e-48 194.9 98 100.0
Thhalv10009743m.g Eutrema salsugineum HOM05D010181 ORTHO05D012280 2.0e-41 172.2 98 87.8
BcaC05g26462 Brassica carinata HOM05D010181 ORTHO05D012280 1.7e-40 169.1 98 87.8
C05p25040 Brassica napus HOM05D010181 ORTHO05D012280 1.7e-40 169.1 98 87.8
BolC5t31237H Brassica oleracea HOM05D010181 ORTHO05D012280 1.7e-40 169.1 98 87.8
BcaC05g26668 Brassica carinata HOM05D010181 ORTHO05D012280 6.5e-40 167.2 98 86.7
A09p39360 Brassica napus HOM05D010181 ORTHO05D012280 1.4e-39 166.0 99 87.9
BraA09t39439Z Brassica rapa HOM05D010181 ORTHO05D012280 3.2e-39 164.9 99 87.9
CARHR026030 Cardamine hirsuta HOM05D010181 ORTHO05D012280 1.4e-37 159.5 98 81.6
BcaB03g14045 Brassica carinata HOM05D010181 ORTHO05D012280 5.0e-32 141.0 98 78.6
A07p12620 Brassica napus HOM05D010181 ORTHO05D012280 5.0e-32 141.0 98 78.6
BraA07t29040Z Brassica rapa HOM05D010181 ORTHO05D012280 5.0e-32 141.0 98 78.6
AT1G25425 Arabidopsis thaliana HOM05D010181 ORTHO05D012280 6.5e-32 140.6 99 78.8
BcaC06g35211 Brassica carinata HOM05D010181 ORTHO05D012280 1.4e-31 139.4 98 77.6
C07p18600 Brassica napus HOM05D010181 ORTHO05D012280 1.4e-31 139.4 98 77.6
BolC7t42373H Brassica oleracea HOM05D010181 ORTHO05D012280 1.4e-31 139.4 98 77.6
AL1G39880 Arabidopsis lyrata HOM05D010181 ORTHO05D012280 4.2e-31 137.9 100 82.0
BcaC06g35203 Brassica carinata HOM05D010181 ORTHO05D012280 4.2e-31 137.9 98 77.6
BcaC06g35204 Brassica carinata HOM05D010181 ORTHO05D012280 4.2e-31 137.9 98 77.6
C07p18710 Brassica napus HOM05D010181 ORTHO05D012280 4.2e-31 137.9 98 77.6
BolC7t42381H Brassica oleracea HOM05D010181 ORTHO05D012280 4.2e-31 137.9 98 77.6
Carub.0001s2506 Capsella rubella HOM05D010181 ORTHO05D012280 3.1e-26 121.7 100 71.0
Aa31LG7G9070 Aethionema arabicum HOM05D010181 ORTHO05D012280 8.0e-22 107.1 97 62.9
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 3.8e-08 61.6 99 35.4
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 1.1e-07 60.1 106 39.6
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 4.2e-07 58.2 96 40.6
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 2.7e-06 55.5 98 36.7
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 2.7e-06 55.5 98 36.7
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.7e-06 55.5 98 37.8
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 3.6e-06 55.1 55 49.1


User provided reference genes

Program Settings