Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 3.2e-254 881.3 460 100.0
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 2.5e-227 792.0 460 89.3
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.7e-221 771.9 460 87.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.9e-214 749.2 465 86.7
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.4e-214 748.8 465 86.9
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 4.2e-214 748.0 460 85.2
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.9e-212 741.5 460 84.3
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.1e-210 735.7 466 85.8
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.7e-210 734.9 466 85.8
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.1e-209 733.4 461 83.5
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 9.3e-206 720.3 464 83.8
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 6.7e-196 687.6 462 78.6
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.4e-148 530.4 453 62.0
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.7e-144 516.2 434 61.8
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.7e-143 513.5 414 63.3
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 2.3e-143 513.1 424 62.3
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 6.6e-143 511.5 435 61.6
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 8.6e-143 511.1 415 63.4
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 5.6e-142 508.4 436 60.3
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.6e-141 506.9 460 58.5
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 2.1e-141 506.5 455 59.3
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 4.7e-141 505.4 443 59.8
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 4.7e-141 505.4 443 59.8
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 6.2e-141 505.0 460 58.5
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.3e-140 503.1 443 59.1
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 3.1e-140 502.7 431 62.6
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.0e-140 502.3 410 62.2
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 4.0e-140 502.3 464 57.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 8.9e-140 501.1 465 57.2
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.6e-139 499.6 459 57.7
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.5e-139 498.0 401 63.6
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 7.5e-139 498.0 409 62.6
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 9.8e-139 497.7 442 58.6
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.3e-138 497.3 433 59.8
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 2.2e-138 496.5 409 61.9
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 2.9e-138 496.1 446 58.1
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 3.7e-138 495.7 449 59.2
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 2.4e-137 493.0 431 59.9
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 2.4e-137 493.0 431 60.1
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.1e-137 492.3 453 58.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 9.2e-137 491.1 439 59.5
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.2e-137 491.1 405 62.2
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 3.5e-136 489.2 430 59.1
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.0e-135 487.6 420 61.2
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.3e-135 487.3 409 60.6
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 1.7e-135 486.9 460 57.8
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 5.0e-135 485.3 412 61.2
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 6.6e-135 485.0 455 58.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 5.6e-134 481.9 448 58.3
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 9.5e-134 481.1 406 60.6
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 3.6e-133 479.2 448 57.6
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.7e-133 478.8 406 60.6
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 4.7e-133 478.8 431 59.2
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 8.1e-133 478.0 462 56.9
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 8.1e-133 478.0 429 57.3
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 5.2e-132 475.3 463 57.0
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.2e-131 474.2 452 55.8
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.0e-131 473.4 408 60.5
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.4e-131 472.2 443 59.1
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.3e-130 470.7 460 55.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 6.4e-130 468.4 445 56.6
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 6.4e-130 468.4 462 56.1
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 1.1e-129 467.6 448 56.9
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.9e-129 466.8 459 54.0
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 3.2e-129 466.1 377 63.1
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 3.2e-129 466.1 381 63.0
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.1e-129 465.7 463 55.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.6e-128 462.2 438 56.4
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 1.0e-127 461.1 450 56.2
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 5.1e-127 458.8 420 55.0
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 8.6e-127 458.0 432 57.4
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 3.6e-125 452.6 456 55.3
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.5e-123 447.2 379 60.7
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.0e-123 446.8 460 54.3
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 2.4e-121 439.9 469 53.1
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 1.3e-119 434.1 420 57.4
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.1e-118 431.0 361 62.6
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.9e-118 430.3 437 54.0
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 6.9e-116 421.8 467 50.7
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 4.4e-115 419.1 425 53.9
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 5.6e-110 402.1 334 62.6
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 4.9e-106 389.0 360 55.0
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 6.4e-106 388.7 330 60.3
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.9e-105 387.1 424 50.9
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 2.1e-104 383.6 402 51.5
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 7.4e-102 375.2 334 60.8
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 2.1e-101 373.6 335 57.6
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 5.5e-97 359.0 390 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 3.0e-95 353.2 411 46.2
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 2.1e-93 347.1 425 45.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.9e-92 342.0 309 60.2
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 6.9e-92 342.0 309 60.2
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.4e-90 335.1 369 49.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 5.5e-89 332.4 298 58.1
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 7.9e-88 328.6 405 44.7
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 6.7e-87 325.5 298 57.7
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.5e-86 323.6 382 47.6
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.8e-85 319.3 298 54.7
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.8e-84 317.4 260 61.5
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 5.9e-83 312.4 437 42.6
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 7.6e-83 312.0 246 63.0
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.8e-79 300.8 336 48.8
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 4.4e-54 216.5 267 47.2
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.4e-46 189.9 140 66.4
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.7e-45 188.0 162 58.6
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.3e-39 167.5 171 57.3
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 4.0e-39 166.8 147 61.2
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.7e-29 134.8 156 48.7
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.9e-29 133.3 105 61.0
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 3.2e-28 130.6 146 45.2
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 6.0e-27 126.3 125 50.4
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.5e-25 121.7 91 63.7
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.5e-25 119.0 122 58.2
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.3e-21 108.6 119 52.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.6e-19 101.7 96 50.0


User provided reference genes

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