Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 1.3e-67 259.6 133 100.0
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 3.7e-62 241.5 133 93.2
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 2.4e-61 238.8 133 91.7
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 2.9e-59 231.9 133 90.2
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 3.8e-59 231.5 147 86.4
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 5.0e-59 231.1 139 87.8
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 1.9e-58 229.2 133 90.2
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 1.6e-57 226.1 143 86.7
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 1.4e-56 223.0 139 84.2
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 2.3e-56 222.2 134 87.3
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 3.0e-56 221.9 141 86.5
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 1.1e-55 219.9 134 86.6
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 2.0e-55 219.2 137 85.4
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 1.8e-53 212.6 147 79.6
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 2.4e-53 212.2 113 96.5
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 3.1e-53 211.8 130 84.6
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 6.9e-53 210.7 123 87.0
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 7.7e-52 207.2 123 84.6
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 7.7e-52 207.2 121 86.0
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 1.7e-51 206.1 123 83.7
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 1.1e-50 203.4 127 81.9
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 3.2e-50 201.8 125 80.8
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 5.5e-50 201.1 125 81.6
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 1.2e-49 199.9 116 87.1
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 1.6e-49 199.5 123 82.1
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 1.6e-49 199.5 121 81.8
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 1.6e-49 199.5 121 81.8
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 1.6e-49 199.5 121 81.8
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 2.7e-49 198.7 125 78.4
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 4.7e-49 198.0 121 81.0
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 7.9e-49 197.2 123 80.5
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 7.9e-49 197.2 118 80.5
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 1.4e-48 196.4 120 80.0
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 1.8e-48 196.1 115 85.2
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 2.3e-48 195.7 124 80.6
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 3.0e-48 195.3 117 83.8
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 3.9e-48 194.9 138 80.4
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 3.9e-48 194.9 122 79.5
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 5.1e-48 194.5 115 84.3
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 1.5e-47 193.0 123 77.2
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 2.6e-47 192.2 123 78.0
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 2.6e-47 192.2 121 77.7
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 7.4e-47 190.7 114 79.8
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 7.4e-47 190.7 120 80.8
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 9.7e-47 190.3 123 77.2
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 1.3e-46 189.9 123 74.8
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 2.2e-46 189.1 123 78.9
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 2.2e-46 189.1 123 78.9
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 6.3e-46 187.6 122 79.5
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 6.3e-46 187.6 123 75.6
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 1.1e-45 186.8 149 67.1
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 1.1e-45 186.8 149 67.1
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 1.8e-45 186.0 132 74.2
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 2.4e-45 185.7 123 77.2
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 4.1e-45 184.9 121 76.9
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 5.3e-45 184.5 136 71.3
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 5.3e-45 184.5 136 71.3
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 7.0e-45 184.1 123 78.0
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 1.5e-44 183.0 120 77.5
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 2.6e-44 182.2 116 81.0
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 2.6e-44 182.2 120 76.7
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 7.7e-44 180.6 130 74.6
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 2.9e-43 178.7 121 77.7
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 3.8e-43 178.3 131 70.2
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 3.8e-43 178.3 117 73.5
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 5.0e-43 177.9 118 76.3
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 8.5e-43 177.2 120 75.0
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 1.1e-42 176.8 127 74.8
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 1.4e-42 176.4 115 75.7
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 1.4e-42 176.4 126 73.8
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 1.9e-42 176.0 121 72.7
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 3.2e-42 175.3 114 78.9
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 5.5e-42 174.5 113 77.9
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 1.2e-41 173.3 132 68.9
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 1.6e-41 172.9 120 75.8
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 2.7e-41 172.2 122 73.0
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.7e-41 171.4 126 70.6
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 6.1e-41 171.0 116 73.3
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 1.8e-40 169.5 118 71.2
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 3.0e-40 168.7 157 59.2
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 3.9e-40 168.3 120 71.7
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 3.9e-40 168.3 118 70.3
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 3.9e-40 168.3 117 73.5
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 4.4e-39 164.9 112 78.6
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 4.4e-39 164.9 117 69.2
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 5.7e-39 164.5 131 72.5
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 5.7e-39 164.5 116 70.7
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 1.7e-38 162.9 112 77.7
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 2.2e-38 162.5 181 51.9
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 1.1e-37 160.2 137 63.5
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 1.1e-37 160.2 128 65.6
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 4.1e-37 158.3 137 65.0
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 4.1e-37 158.3 118 66.9
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 7.0e-37 157.5 118 66.9
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 7.0e-37 157.5 115 73.9
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 4.5e-36 154.8 115 65.2
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 5.9e-36 154.5 148 62.2
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 5.9e-36 154.5 115 73.0
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.9e-35 152.1 113 73.5
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 2.9e-35 152.1 107 69.2
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 3.2e-34 148.7 119 64.7
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 7.2e-34 147.5 126 63.5
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 7.2e-34 147.5 123 63.4
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 2.7e-33 145.6 121 62.8
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 2.7e-33 145.6 133 63.9
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 4.7e-33 144.8 164 53.7
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 6.1e-33 144.4 90 77.8
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 5.2e-32 141.4 134 60.4
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 1.2e-31 140.2 134 60.4
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 1.2e-31 140.2 128 55.5
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 1.5e-31 139.8 88 75.0
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 2.0e-28 129.4 85 74.1
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 2.7e-28 129.0 118 61.0
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 1.0e-27 127.1 106 58.5
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 1.3e-27 126.7 129 53.5
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 8.5e-27 124.0 84 72.6
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.5e-26 123.2 181 43.1
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 9.4e-26 120.6 105 55.2
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 1.6e-25 119.8 106 56.6
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 8.0e-25 117.5 70 78.6
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.4e-24 116.7 111 61.3
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 1.8e-24 116.3 83 73.5
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 1.2e-23 113.6 69 78.3
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 3.4e-23 112.1 70 74.3
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 1.1e-18 97.1 83 66.3
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 1.8e-16 89.7 49 89.8
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 5.2e-16 88.2 60 68.3
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 1.2e-12 77.0 107 41.1
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 2.1e-09 66.2 48 64.6
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-09 65.5 68 60.3
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 8.0e-09 64.3 47 70.2


User provided reference genes

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