Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.7e-188 661.4 331 100.0
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 8.5e-177 623.6 331 93.7
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 5.5e-176 620.9 331 94.0
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 4.0e-174 614.8 333 92.2
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 8.3e-172 607.1 331 91.8
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 5.9e-170 600.9 331 90.3
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 6.6e-169 597.4 331 90.0
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.1e-168 596.7 332 90.4
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.5e-168 596.3 331 90.0
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.9e-168 595.9 331 90.0
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 6.1e-167 590.9 331 89.4
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.1e-160 570.1 331 86.7
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.4e-158 563.1 332 83.7
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 2.4e-139 499.2 326 76.4
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 4.1e-139 498.4 332 74.7
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.6e-138 496.5 323 75.2
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 6.0e-138 494.6 320 75.6
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.0e-137 493.8 319 76.2
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 3.9e-137 491.9 332 74.4
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 7.3e-136 487.6 332 73.8
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 1.8e-134 483.0 321 73.5
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.4e-134 482.6 324 73.1
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 4.0e-134 481.9 320 73.8
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 5.2e-134 481.5 328 72.0
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 6.8e-134 481.1 323 72.4
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 3.4e-133 478.8 323 73.4
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.8e-133 478.0 329 72.6
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 7.6e-133 477.6 322 73.9
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-132 476.1 320 72.5
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-132 476.1 320 72.5
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.9e-132 474.9 320 72.5
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.4e-131 473.4 323 72.1
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 1.4e-131 473.4 323 72.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 4.2e-131 471.9 320 72.8
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 7.1e-131 471.1 331 71.6
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 7.1e-131 471.1 319 73.0
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 9.3e-131 470.7 323 71.8
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 9.3e-131 470.7 322 73.3
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.6e-130 469.9 320 72.2
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 2.1e-130 469.5 328 70.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.1e-130 469.5 322 73.9
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 3.5e-130 468.8 319 70.2
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 3.5e-130 468.8 322 73.0
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 4.6e-130 468.4 329 70.2
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 7.8e-130 467.6 331 71.0
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 1.3e-129 466.8 329 68.4
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.3e-129 466.8 320 71.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 3.0e-129 465.7 322 72.4
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 3.0e-129 465.7 323 71.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.1e-128 463.8 322 70.5
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.5e-128 463.4 320 70.3
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.9e-128 463.0 343 67.6
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.5e-128 462.6 322 71.7
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 2.5e-128 462.6 322 71.4
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 3.6e-127 458.8 322 71.4
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 6.2e-127 458.0 340 69.4
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.8e-126 456.4 324 70.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 4.0e-126 455.3 331 69.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 4.0e-126 455.3 322 70.2
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 5.3e-126 454.9 312 71.5
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 6.9e-126 454.5 318 71.7
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 2.6e-125 452.6 344 66.0
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 7.6e-125 451.1 329 69.6
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 7.6e-125 451.1 316 71.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.7e-124 449.9 319 68.7
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 2.9e-124 449.1 319 68.7
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 3.8e-124 448.7 322 68.9
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 6.4e-124 448.0 341 68.0
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.4e-123 446.8 333 69.1
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 3.5e-122 442.2 321 69.5
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 2.3e-121 439.5 331 68.9
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 3.9e-121 438.7 319 68.3
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 2.5e-120 436.0 330 66.1
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 6.2e-119 431.4 309 68.3
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 6.9e-118 427.9 322 68.3
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 4.5e-117 425.2 321 67.0
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.2e-115 418.7 281 72.2
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 7.9e-114 414.5 281 71.2
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 8.1e-111 404.4 325 63.7
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 8.1e-111 404.4 330 63.0
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.4e-110 402.9 327 61.5
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.6e-109 399.4 308 66.9
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 3.8e-108 395.6 330 63.9
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 2.4e-102 376.3 323 60.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 2.6e-101 372.9 373 56.3
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.6e-101 371.3 270 70.0
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 2.9e-100 369.4 353 56.9
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 5.0e-100 368.6 392 52.0
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 1.4e-99 367.1 320 58.4
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.5e-99 366.3 323 61.0
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 3.1e-94 349.4 355 53.8
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.9e-92 342.8 318 55.3
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 2.3e-89 333.2 322 55.6
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 3.0e-81 306.2 317 52.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.5e-80 303.9 231 67.1
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.7e-79 300.4 207 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 8.2e-71 271.6 294 52.0
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 5.2e-65 252.3 277 50.9
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 8.0e-58 228.4 353 40.5
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 9.2e-54 214.9 303 40.9
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 6.8e-49 198.7 167 61.7
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.3e-47 194.5 185 54.6
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.5e-43 181.0 184 54.3
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.0e-40 170.6 104 78.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.0e-40 170.6 119 65.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 6.6e-36 155.6 117 63.2
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.1e-17 95.1 229 31.9
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 2.4e-17 94.0 81 61.7
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.1e-11 75.1 52 65.4
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 2.4e-09 67.4 83 45.8
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 5.3e-09 66.2 51 60.8
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 9.0e-09 65.5 78 47.4


User provided reference genes

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