Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 2.3e-196 688.7 357 100.0
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 3.5e-160 568.5 318 91.5
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 6.0e-152 541.2 327 86.5
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.3e-149 533.5 321 86.6
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.6e-149 533.1 330 86.1
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 8.1e-149 530.8 324 86.1
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 1.4e-145 520.0 325 84.3
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.5e-139 500.0 325 78.5
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 6.5e-138 494.6 332 82.2
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 6.5e-138 494.6 328 82.3
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 6.5e-138 494.6 332 82.2
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 3.5e-136 488.8 330 80.9
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.1e-134 483.8 330 80.0
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 5.0e-122 441.8 325 70.8
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 2.7e-120 436.0 321 71.0
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 4.0e-95 352.4 321 59.2
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 5.7e-94 348.6 250 69.2
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 7.5e-94 348.2 305 60.7
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.5e-94 348.2 292 64.7
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 9.8e-94 347.8 292 64.4
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.4e-92 344.0 303 61.7
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.6e-91 340.5 291 63.2
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 7.7e-91 338.2 320 57.2
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.0e-90 337.8 325 58.5
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.8e-90 335.9 291 61.9
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 8.5e-90 334.7 318 57.9
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 2.5e-89 333.2 235 68.5
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 7.2e-89 331.6 231 70.6
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 7.2e-89 331.6 322 56.8
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 7.2e-89 331.6 288 63.2
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 2.1e-88 330.1 232 69.8
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 1.4e-87 327.4 275 62.2
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 2.3e-87 326.6 271 61.3
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 2.3e-87 326.6 249 64.7
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 2.3e-87 326.6 275 62.5
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 5.2e-87 325.5 307 57.3
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 8.8e-87 324.7 254 65.0
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.5e-86 323.9 249 64.7
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.5e-86 323.9 293 58.7
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.0e-86 323.6 228 67.1
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.3e-85 320.9 269 60.2
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.7e-85 320.5 238 63.9
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 1.7e-85 320.5 326 53.7
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 8.3e-85 318.2 231 66.7
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.4e-84 317.4 275 61.1
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 3.1e-84 316.2 280 58.2
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 1.6e-83 313.9 236 63.6
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.0e-83 313.5 315 52.1
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 4.5e-83 312.4 253 63.6
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 4.5e-83 312.4 256 60.9
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 5.9e-83 312.0 286 59.4
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.0e-82 311.2 315 51.7
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.3e-82 310.1 274 58.0
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 2.3e-82 310.1 257 58.4
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.9e-82 309.7 274 58.0
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 2.9e-82 309.7 326 51.5
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.8e-82 309.3 247 62.3
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 5.0e-82 308.9 309 54.7
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 6.6e-82 308.5 279 58.1
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 1.9e-81 307.0 273 57.1
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 9.5e-81 304.7 309 52.1
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 9.5e-81 304.7 321 51.4
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.7e-80 302.4 272 57.7
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 1.0e-79 301.2 305 52.8
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 1.8e-79 300.4 260 60.0
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 1.5e-78 297.4 244 60.7
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 4.4e-78 295.8 300 52.0
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 5.7e-78 295.4 317 50.5
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 5.7e-78 295.4 226 63.7
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.8e-78 294.7 329 51.1
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 3.7e-77 292.7 336 50.6
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 3.7e-77 292.7 240 60.4
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 4.9e-77 292.4 223 61.4
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-76 291.2 329 50.8
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 4.1e-76 289.3 306 52.0
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 7.0e-76 288.5 323 52.6
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.2e-75 287.7 302 50.7
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 2.7e-75 286.6 225 60.9
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 3.5e-75 286.2 278 52.5
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 4.6e-75 285.8 331 49.8
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 4.6e-75 285.8 241 57.7
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 1.3e-74 284.3 348 47.7
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.7e-74 283.9 279 54.5
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 5.0e-74 282.3 285 52.3
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 8.6e-74 281.6 251 59.8
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 1.9e-73 280.4 262 53.8
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 1.9e-73 280.4 316 50.0
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 1.9e-73 280.4 258 55.0
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 9.5e-73 278.1 267 53.6
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.1e-72 276.9 235 57.4
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 2.1e-72 276.9 242 57.4
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 3.6e-72 276.2 220 58.2
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 6.2e-72 275.4 276 51.4
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 1.0e-71 274.6 308 50.6
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 4.9e-69 265.8 291 54.0
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 3.2e-68 263.1 289 50.2
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 1.2e-67 261.2 210 63.8
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 1.6e-67 260.8 190 64.2
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 3.0e-66 256.5 274 50.7
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 6.2e-64 248.8 215 56.7
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 8.9e-63 245.0 311 45.7
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 9.2e-60 235.0 306 42.8
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 1.9e-57 227.3 203 55.7
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 2.3e-55 220.3 223 51.6
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 4.0e-55 219.5 185 59.5
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 3.4e-54 216.5 202 59.4
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 2.4e-52 210.3 264 46.2
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.2e-52 209.9 211 48.3
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 8.6e-50 201.8 142 66.9
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.6e-48 196.4 156 60.3
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 6.9e-47 192.2 313 39.3
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 2.6e-46 190.3 241 43.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 8.4e-45 185.3 227 47.1
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.5e-43 179.9 212 43.4
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-40 168.7 267 40.1
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 8.1e-40 168.7 267 40.1
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 5.3e-39 166.0 305 36.7
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 1.5e-38 164.5 233 41.6
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 7.1e-36 155.6 200 42.0
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.8e-26 124.4 184 41.3
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.6e-24 117.9 79 68.4
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 4.8e-24 116.3 214 35.5
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 8.2e-24 115.5 95 61.1
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.2e-13 80.9 80 55.0
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.3e-08 65.1 241 22.4
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 2.6e-06 57.4 158 27.2


User provided reference genes

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