Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g21310 Schrenkiella parvula HOM05D008804 ORTHO05D021419 5.5e-77 290.8 139 100.0
Sp1g21340 Schrenkiella parvula HOM05D008804 ORTHO05D021419 1.7e-41 172.9 142 60.6
AT1G24010 Arabidopsis thaliana HOM05D008804 ORTHO05D021419 7.1e-32 141.0 138 51.4
AL1G38840 Arabidopsis lyrata HOM05D008804 ORTHO05D021419 6.2e-20 101.3 143 39.2
Sp1g21330 Schrenkiella parvula HOM05D008804 ORTHO05D021419 6.2e-20 101.3 139 39.6
Carub.0008s0722 Capsella rubella HOM05D008804 ORTHO05D021419 2.2e-17 92.8 141 38.3
AT1G24000 Arabidopsis thaliana HOM05D008804 ORTHO05D011259 3.3e-13 79.0 135 31.9
Thhalv10009502m.g Eutrema salsugineum HOM05D008804 ORTHO05D011259 4.3e-13 78.6 135 34.1
C07p20130 Brassica napus HOM05D008804 ORTHO05D011259 1.3e-12 77.0 136 33.8
BolC7t42534H Brassica oleracea HOM05D008804 ORTHO05D011259 1.3e-12 77.0 136 33.8
C07p25990 Brassica napus HOM05D008804 ORTHO05D011259 8.1e-12 74.3 136 33.1
BolC7t43128H Brassica oleracea HOM05D008804 ORTHO05D011259 8.1e-12 74.3 136 33.1
BraA07t29120Z Brassica rapa HOM05D008804 ORTHO05D011259 1.8e-11 73.2 136 33.1
A07p13490 Brassica napus HOM05D008804 ORTHO05D011259 2.4e-11 72.8 136 33.1
A08p27940 Brassica napus HOM05D008804 ORTHO05D011259 6.9e-11 71.2 135 32.6
BraA08t34725Z Brassica rapa HOM05D008804 ORTHO05D011259 6.9e-11 71.2 135 32.6
AL1G37760 Arabidopsis lyrata HOM05D008804 ORTHO05D011259 1.2e-10 70.5 133 28.6
A09p40860 Brassica napus HOM05D008804 ORTHO05D011259 1.2e-10 70.5 138 30.4
BcaB03g11962 Brassica carinata HOM05D008804 ORTHO05D011259 1.5e-10 70.1 135 32.6
BcaC05g26296 Brassica carinata HOM05D008804 ORTHO05D011259 1.5e-10 70.1 138 30.4
C05p23110 Brassica napus HOM05D008804 ORTHO05D011259 1.5e-10 70.1 138 30.4
BolC5t31010H Brassica oleracea HOM05D008804 ORTHO05D011259 1.5e-10 70.1 138 30.4
BolC5t31012H Brassica oleracea HOM05D008804 ORTHO05D011259 1.5e-10 70.1 138 30.4
C08p22190 Brassica napus HOM05D008804 ORTHO05D011259 2.6e-10 69.3 135 32.6
BolC8t49865H Brassica oleracea HOM05D008804 ORTHO05D011259 2.6e-10 69.3 135 32.6
BraA09t39578Z Brassica rapa HOM05D008804 ORTHO05D011259 2.6e-10 69.3 133 30.8
Sp1g21290 Schrenkiella parvula HOM05D008804 ORTHO05D011259 2.6e-10 69.3 136 31.6
BcaC07g39224 Brassica carinata HOM05D008804 ORTHO05D011259 3.4e-10 68.9 135 32.6
A07p13680 Brassica napus HOM05D008804 ORTHO05D011259 7.6e-10 67.8 130 32.3
BcaB07g32370 Brassica carinata HOM05D008804 ORTHO05D011259 9.9e-10 67.4 138 29.7
Sp1g21280 Schrenkiella parvula HOM05D008804 ORTHO05D011259 1.7e-09 66.6 139 32.4
C08p22180 Brassica napus HOM05D008804 ORTHO05D011259 2.1e-07 59.7 132 30.3
BolC8t49864H Brassica oleracea HOM05D008804 ORTHO05D011259 2.1e-07 59.7 132 30.3
AT5G28000 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 7.9e-07 57.8 146 28.8
A07p13480 Brassica napus HOM05D000197 ORTHO05D000114 7.9e-07 57.8 135 29.6
A08p27950 Brassica napus HOM05D008804 ORTHO05D011259 7.9e-07 57.8 132 29.5
BraA08t34726Z Brassica rapa HOM05D008804 ORTHO05D011259 7.9e-07 57.8 132 29.5
BcaB03g11964 Brassica carinata HOM05D009416 ORTHO05D014496 2.3e-06 56.2 129 26.4
BcaB03g14125 Brassica carinata HOM05D008804 ORTHO05D011259 2.3e-06 56.2 136 27.9
BolC8t49866H Brassica oleracea HOM05D009416 ORTHO05D014496 3.0e-06 55.8 127 27.6


User provided reference genes

Program Settings