Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g20500 Schrenkiella parvula HOM05D007874 ORTHO05D009614 1.4e-55 219.9 161 100.0
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 2.5e-33 146.0 163 67.5
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 1.6e-27 126.7 157 65.6
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 2.7e-27 125.9 157 65.6
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 2.3e-26 122.9 157 65.0
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 2.3e-26 122.9 157 65.0
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 2.3e-26 122.9 157 65.0
Carub.0001s2257 Capsella rubella HOM05D007874 ORTHO05D009614 9.1e-23 110.9 159 52.8
AL1G36620 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 1.5e-22 110.2 163 55.2
Thhalv10009563m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 1.6e-19 100.1 161 62.1
CARHR023430 Cardamine hirsuta HOM05D007874 ORTHO05D009614 4.4e-17 92.0 163 55.2
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 7.7e-14 81.3 145 55.2
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 2.9e-13 79.3 147 47.6
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 3.8e-13 79.0 143 51.0
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 2.5e-12 76.3 141 45.4
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 2.5e-12 76.3 150 50.0
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 9.4e-12 74.3 141 39.7
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 6.1e-11 71.6 138 52.9
C02p28490 Brassica napus HOM05D009085 ORTHO05D010299 3.7e-08 62.4 134 53.0
BolC2t08890H Brassica oleracea HOM05D009085 ORTHO05D010299 3.7e-08 62.4 134 53.0
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 2.4e-07 59.7 107 46.7
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 5.3e-07 58.5 134 41.0
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 9.1e-07 57.8 123 35.0
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 2.0e-06 56.6 158 29.7
Carub.0002s1776 Capsella rubella HOM05D007874 ORTHO05D009614 2.6e-06 56.2 32 75.0
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 4.5e-06 55.5 160 30.6
BcaB03g14857 Brassica carinata HOM05D007874 ORTHO05D009614 7.7e-06 54.7 33 72.7
A07p37380 Brassica napus HOM05D007874 ORTHO05D009614 7.7e-06 54.7 33 72.7
BraA07t31296Z Brassica rapa HOM05D007874 ORTHO05D009614 7.7e-06 54.7 33 72.7


User provided reference genes

Program Settings