Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 9.4e-65 250.0 121 100.0
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 3.6e-56 221.5 122 86.9
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 8.0e-56 220.3 121 86.0
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 8.8e-55 216.9 121 84.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 6.3e-53 210.7 122 83.6
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 3.8e-50 201.4 121 80.2
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 8.5e-50 200.3 113 83.2
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.5e-49 199.5 121 79.3
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.9e-49 199.1 121 80.2
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 6.1e-48 194.1 113 81.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 6.8e-47 190.7 126 74.6
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.2e-46 189.9 122 75.4
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 4.9e-37 157.9 119 63.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.1e-36 155.2 122 63.1
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 7.0e-36 154.1 101 75.2
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-35 152.1 76 88.2
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-35 152.1 76 88.2
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.7e-35 152.1 96 70.8
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 3.5e-35 151.8 101 69.3
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.7e-34 149.4 101 73.3
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 2.3e-34 149.1 75 85.3
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 3.8e-34 148.3 85 76.5
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 3.8e-34 148.3 81 80.2
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.8e-34 148.3 83 77.1
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 8.6e-34 147.1 104 70.2
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 8.6e-34 147.1 103 68.9
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.9e-33 146.0 96 69.8
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.5e-33 145.6 80 78.8
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.3e-33 145.2 111 63.1
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 5.6e-33 144.4 122 60.7
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 7.3e-33 144.1 77 81.8
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 7.3e-33 144.1 121 58.7
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 9.5e-33 143.7 78 78.2
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 9.5e-33 143.7 80 78.8
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.6e-32 142.9 126 57.9
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.6e-32 142.9 86 77.9
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.8e-32 142.1 85 75.3
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 6.1e-32 141.0 80 80.0
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 8.0e-32 140.6 100 69.0
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.0e-31 140.2 84 73.8
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.0e-31 140.2 100 69.0
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.0e-31 140.2 100 69.0
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.4e-31 139.8 87 73.6
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.4e-31 139.8 84 73.8
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.3e-31 139.0 77 79.2
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.3e-31 139.0 102 63.7
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.4e-30 134.8 63 88.9
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 4.4e-30 134.8 63 88.9
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 7.5e-30 134.0 69 82.6
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.7e-29 131.7 63 85.7
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.7e-29 131.7 63 85.7
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.8e-28 129.4 80 72.5
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.0e-27 125.9 88 64.8
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.7e-26 122.9 119 58.8
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 2.3e-26 122.5 111 59.5
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 3.9e-26 121.7 121 51.2
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 8.6e-26 120.6 101 65.3
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 4.3e-25 118.2 126 50.8
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.1e-24 115.9 85 60.0
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.1e-24 115.9 125 52.8
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.4e-23 113.2 79 67.1
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 3.4e-22 108.6 121 47.9
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 5.8e-22 107.8 52 84.6
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 4.9e-21 104.8 119 51.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 6.4e-21 104.4 105 53.3
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.9e-20 102.8 46 93.5
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 3.2e-20 102.1 62 71.0
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 4.1e-20 101.7 121 45.5
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.3e-18 96.7 45 88.9
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.7e-18 96.3 78 57.7
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 6.6e-18 94.4 46 89.1
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 5.6e-17 91.3 56 75.0
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 7.3e-17 90.9 66 62.1
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 4.7e-16 88.2 96 49.0
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 4.7e-16 88.2 122 44.3
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.4e-15 86.7 101 48.5
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 4.0e-15 85.1 89 52.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 4.0e-15 85.1 121 45.5
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.3e-13 80.1 55 65.5
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 3.7e-13 78.6 55 63.6
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.2e-11 73.6 86 48.8
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 8.1e-08 60.8 30 80.0


User provided reference genes

Program Settings