Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.2e-49 199.5 101 100.0
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 2.0e-44 182.2 101 90.1
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.2e-43 178.7 101 91.1
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 3.5e-41 171.4 101 87.1
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 3.5e-41 171.4 101 87.1
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 3.5e-41 171.4 101 87.1
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.3e-40 168.7 101 87.1
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.3e-40 168.7 101 87.1
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.3e-40 168.7 101 87.1
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.3e-40 168.7 101 87.1
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 5.1e-40 167.5 101 86.1
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-39 166.0 101 85.1
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.9e-39 165.6 100 85.0
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.9e-39 165.6 100 85.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.9e-39 165.6 101 85.1
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 3.3e-39 164.9 100 84.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 9.6e-39 163.3 101 83.2
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 9.6e-39 163.3 83 96.4
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.4e-37 159.5 101 80.2
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.0e-36 155.6 93 83.9
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.5e-36 154.5 100 79.0
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 5.0e-35 151.0 79 92.4
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 1.2e-33 146.4 95 77.9
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 4.6e-33 144.4 96 74.0
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 6.1e-33 144.1 86 79.1
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 7.9e-33 143.7 98 74.5
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.8e-32 142.5 89 78.7
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 2.3e-32 142.1 101 72.3
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 3.0e-32 141.7 91 73.6
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.7e-32 140.6 89 73.0
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.1e-31 139.8 88 77.3
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.5e-31 138.7 85 80.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 2.5e-31 138.7 97 75.3
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.3e-31 138.3 89 73.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 5.7e-31 137.5 84 79.8
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.7e-31 137.5 98 72.4
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 5.7e-31 137.5 84 79.8
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 7.4e-31 137.1 84 79.8
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 9.7e-31 136.7 93 72.0
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.8e-30 135.2 83 78.3
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 2.8e-30 135.2 89 70.8
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.8e-30 135.2 99 63.6
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 4.8e-30 134.4 98 73.5
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 77.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 77.1
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 77.1
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 4.8e-30 134.4 83 78.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 6.3e-30 134.0 99 67.7
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 6.3e-30 134.0 84 71.4
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.3e-30 134.0 94 69.1
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.1e-29 133.3 82 76.8
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 1.1e-29 133.3 79 79.7
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-29 133.3 90 71.1
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.1e-29 133.3 85 74.1
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.4e-29 132.9 86 75.6
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.8e-29 132.5 83 77.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.8e-29 132.5 83 77.1
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 1.8e-29 132.5 89 70.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.4e-29 132.1 83 75.9
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.4e-29 132.1 91 69.2
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.4e-29 132.1 91 69.2
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 2.4e-29 132.1 92 66.3
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 3.1e-29 131.7 96 71.9
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 4.1e-29 131.3 85 71.8
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 4.1e-29 131.3 83 77.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 4.1e-29 131.3 86 74.4
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 5.3e-29 131.0 66 95.5
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 5.3e-29 131.0 83 78.3
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.3e-29 131.0 83 78.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 5.3e-29 131.0 98 71.4
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 6.9e-29 130.6 96 66.7
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 6.9e-29 130.6 82 78.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 6.9e-29 130.6 86 74.4
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.9e-29 130.6 98 69.4
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 6.9e-29 130.6 91 72.5
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 9.0e-29 130.2 78 76.9
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.2e-28 129.8 96 69.8
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.2e-28 129.8 98 69.4
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.2e-28 129.8 96 67.7
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.2e-28 129.8 86 74.4
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.5e-28 129.4 98 68.4
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.5e-28 129.4 85 76.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.0e-28 129.0 95 69.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.0e-28 129.0 89 70.8
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.6e-28 128.6 76 80.3
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.6e-28 128.6 84 75.0
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 2.6e-28 128.6 91 70.3
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.6e-28 128.6 79 79.7
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.5e-28 127.9 85 74.1
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.9e-28 127.5 83 73.5
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 5.9e-28 127.5 83 77.1
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 7.7e-28 127.1 91 69.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 7.7e-28 127.1 81 69.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.0e-27 126.7 79 78.5
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.3e-27 126.3 92 69.6
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 2.2e-27 125.6 74 77.0
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.9e-27 125.2 91 68.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 2.9e-27 125.2 94 63.8
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 6.5e-27 124.0 91 68.1
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.5e-27 124.0 79 74.7
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 8.5e-27 123.6 99 65.7
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.4e-26 122.9 91 71.4
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.9e-26 122.5 97 64.9
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.1e-25 119.0 110 57.3
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.1e-25 117.5 79 70.9
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.0e-24 116.7 105 59.0
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 1.8e-24 115.9 80 70.0
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 3.9e-24 114.8 77 70.1
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 3.9e-24 114.8 82 67.1
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 5.1e-24 114.4 73 74.0
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 8.8e-24 113.6 81 70.4
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.0e-23 112.5 80 68.8
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.5e-23 112.1 72 77.8
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.5e-23 112.1 73 76.7
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 4.3e-23 111.3 73 74.0
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 4.3e-23 111.3 67 79.1
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.3e-22 109.8 92 64.1
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 4.1e-21 104.8 66 75.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.2e-19 99.0 72 63.9
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 3.9e-16 88.2 72 62.5
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 4.4e-15 84.7 98 55.1
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 7.4e-15 84.0 70 55.7
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 4.8e-14 81.3 61 65.6
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.4e-13 79.0 47 78.7
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 5.3e-13 77.8 62 54.8
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-12 74.3 48 77.1
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-12 74.3 48 77.1
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 5.9e-12 74.3 48 77.1
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 5.0e-11 71.2 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 6.5e-11 70.9 49 63.3
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.2e-10 68.2 61 57.4
BcaB01g03422 Brassica carinata HOM05D037851 ORTHO05D006822 6.1e-09 64.3 106 47.2
BcaB02g06981 Brassica carinata HOM05D037851 ORTHO05D006822 6.1e-09 64.3 106 47.2
BcaB02g06986 Brassica carinata HOM05D037851 ORTHO05D006822 6.1e-09 64.3 106 47.2


User provided reference genes

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