Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.9e-57 225.7 122 100.0
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 1.3e-53 213.0 122 91.8
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 2.2e-53 212.2 122 93.4
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 2.2e-53 212.2 122 93.4
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 2.9e-53 211.8 122 91.0
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 3.7e-53 211.5 122 91.0
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 4.9e-53 211.1 122 92.6
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.1e-52 209.9 123 91.1
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.4e-52 209.5 122 89.3
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 2.4e-52 208.8 122 91.8
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 4.1e-52 208.0 122 87.7
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 4.1e-52 208.0 122 88.5
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 7.8e-51 203.8 122 86.9
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 1.0e-50 203.4 123 87.0
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.3e-50 203.0 122 90.2
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 1.1e-49 199.9 121 90.1
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 1.1e-49 199.9 121 90.1
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 1.9e-49 199.1 121 90.1
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 1.9e-49 199.1 121 90.1
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 3.3e-49 198.4 120 90.0
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 1.2e-48 196.4 122 85.2
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 3.6e-48 194.9 122 85.2
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.5e-46 189.5 148 73.0
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 9.8e-46 186.8 122 77.9
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 9.8e-46 186.8 122 79.5
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 2.9e-45 185.3 120 80.8
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 77.0
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.4e-44 183.0 120 80.0
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 77.9
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 2.4e-44 182.2 122 78.7
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 2.4e-44 182.2 122 78.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.2e-44 181.8 122 76.2
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 4.1e-44 181.4 122 77.0
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.4e-44 181.0 122 76.2
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 5.4e-44 181.0 122 76.2
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 5.4e-44 181.0 122 74.6
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 7.1e-44 180.6 122 77.9
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 7.1e-44 180.6 120 79.2
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 9.2e-44 180.3 122 75.4
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.1e-43 179.1 122 76.2
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 2.1e-43 179.1 122 76.2
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 2.7e-43 178.7 119 79.0
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 77.0
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 77.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 3.5e-43 178.3 122 74.6
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.5e-43 178.3 122 74.6
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.5e-43 178.3 122 75.4
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 4.6e-43 177.9 120 75.8
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 74.6
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 77.0
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 76.2
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 76.2
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 7.8e-43 177.2 122 75.4
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 1.0e-42 176.8 122 76.2
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.0e-42 176.8 122 73.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.0e-42 176.8 122 75.4
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.3e-42 176.4 122 76.2
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 1.3e-42 176.4 122 74.6
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 1.7e-42 176.0 122 73.8
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 2.3e-42 175.6 122 74.6
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 3.0e-42 175.3 120 77.5
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 3.0e-42 175.3 121 73.6
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 3.0e-42 175.3 120 76.7
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 5.1e-42 174.5 120 74.2
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 8.6e-42 173.7 122 73.0
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 8.6e-42 173.7 122 73.0
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.5e-41 172.9 122 73.8
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.5e-41 172.9 122 73.0
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 3.3e-41 171.8 122 73.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 3.3e-41 171.8 121 73.6
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 4.3e-41 171.4 122 74.6
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 9.5e-41 170.2 120 72.5
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.2e-40 169.9 122 70.5
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 1.6e-40 169.5 122 71.3
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 1.6e-40 169.5 122 73.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 2.1e-40 169.1 121 72.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 2.8e-40 168.7 120 71.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 2.8e-40 168.7 122 71.3
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 3.6e-40 168.3 120 72.5
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 6.2e-40 167.5 122 70.5
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 6.2e-40 167.5 122 72.1
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 6.2e-40 167.5 122 70.5
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 6.2e-40 167.5 120 72.5
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 1.1e-39 166.8 122 72.1
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.1e-39 166.8 122 69.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.4e-39 166.4 120 71.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 1.8e-39 166.0 120 71.7
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 2.3e-39 165.6 122 69.7
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.3e-39 165.6 115 75.7
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.8e-39 164.1 122 71.3
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 8.9e-39 163.7 120 70.0
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.2e-38 163.3 120 69.2
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 1.5e-38 162.9 120 72.5
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 7.6e-38 160.6 120 70.8
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 9.9e-38 160.2 122 71.3
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 2.2e-37 159.1 119 71.4
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 2.2e-37 159.1 119 71.4
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.7e-37 158.3 122 72.1
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 3.7e-37 158.3 115 72.2
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 4.9e-37 157.9 118 67.8
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.1e-36 156.8 108 75.0
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.9e-36 156.0 172 53.5
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 2.4e-36 155.6 122 65.6
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 9.2e-36 153.7 136 64.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 1.3e-34 149.8 122 65.6
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 3.9e-34 148.3 131 63.4
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 1.5e-33 146.4 127 70.9
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.5e-33 145.6 122 63.9
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 2.6e-30 135.6 115 61.7
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 4.4e-30 134.8 91 79.1
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 9.9e-30 133.7 119 60.5
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 1.7e-29 132.9 91 75.8
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.1e-28 130.2 91 73.6
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.4e-28 129.8 94 73.4
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 3.2e-28 128.6 103 66.0
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 3.2e-28 128.6 91 74.7
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 1.1e-25 120.2 101 62.4
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 2.9e-21 105.5 68 79.4
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.0e-18 97.1 70 68.6
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 8.7e-18 94.0 111 45.0
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 3.1e-15 85.5 60 78.3
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.3e-13 80.1 58 77.6
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.0e-11 71.2 45 75.6
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.5e-09 66.6 52 73.1
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.5e-09 65.9 51 62.7
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 1.3e-08 63.5 50 74.0


User provided reference genes

Program Settings